RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB10140", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJEB10140 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29932018 29932018 PRJEB10140_P_NODE_24891_length_1303_cov_5.432217_g14782_i0 PRJEB10140 24891 1303 5.432217 70.78178751 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62 4.87e-6   NR XP_013758226.1 461836 g14782 i0 20.5 2.24021488871834 365 257 84 9 1297 203 1998 2329 XP_013758226.1 uncharacterized protein AMSG_11847 [Thecamonas trahens ATCC 50062] diamond 2919 62 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31707604 31707604 PRJEB10140_P_NODE_106737_length_342_cov_2.464164_g89438_i0 PRJEB10140 106737 342 2.464164 8.42744088 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 121 2.4799999999999996e-29   NR XP_013754426.1 461836 g89438 i0 50.9 2 114 56 100 0 342 1 121 234 XP_013754426.1 uncharacterized protein AMSG_08886 [Thecamonas trahens ATCC 50062] diamond 684 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32024136 32024136 PRJEB10140_P_NODE_17518_length_1643_cov_2.157465_g10015_i0 PRJEB10140 17518 1643 2.157465 35.44714995 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.4 0.0237   NR XP_013754426.1 461836 g10015 i0 28.5 0.25015216068168 137 79 21.9 6 1569 1210 318 452 XP_013754426.1 uncharacterized protein AMSG_08886 [Thecamonas trahens ATCC 50062] diamond 411 50.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;