contig_metadata
19 rows where bioproject = "PRJDB9741" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2560674 | 2560674 | PRJDB9741_P_NODE_13803_length_189_cov_1.171429_g13486_i0 | PRJDB9741 | 13803 | 189 | 1.171429 | 2.21400081 | uncultured Spartobacteria bacterium | 333969 | Bacteria | Bacteria | 263 | 6.879999999999999e-66 | NTclustered | gi|409969675|gb|JQ701281.1| | 333969 | g13486 | i0 | 92.896 | 96.010582010582 | 183 | 9 | 96 | 3 | 9 | 189 | 55 | 235 | Uncultured Spartobacteria bacterium clone Flu3_11 16S ribosomal RNA gene, partial sequence | blastn | 18146 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | uncultured Spartobacteria bacterium | ||||
| 2560889 | 2560889 | PRJDB9741_P_NODE_4283_length_314_cov_3.509434_g3967_i0 | PRJDB9741 | 4283 | 314 | 3.509434 | 11.01962276 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 390 | 5.479999999999999e-104 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g3967 | i0 | 94.141 | 222.162420382166 | 256 | 15 | 82 | 0 | 2 | 257 | 1349 | 1094 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 69759 | 390 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 4809760 | 4809760 | PRJDB9741_P_NODE_304_length_1585_cov_3.732422_g208_i0 | PRJDB9741 | 304 | 1585 | 3.732422 | 59.1588887 | Chthoniobacter sp. | 2510640 | Bacteria | Bacteria | 844 | 2.88e-305 | NR | MDR3405335.1 | 2510640 | g208 | i0 | 88.6 | 0.878233438485804 | 464 | 53 | 87.8 | 0 | 61 | 1452 | 1 | 464 | MDR3405335.1 translation elongation factor EF1A family protein [Chthoniobacter sp.] | diamond | 1392 | 844 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter sp. | |
| 7359560 | 7359560 | PRJDB9741_P_NODE_4406_length_309_cov_2.388462_g4090_i0 | PRJDB9741 | 4406 | 309 | 2.388462 | 7.38034758 | Prosthecobacter | 48463 | Bacteria | Bacteria | 525 | 1.4099999999999995e-144 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g4090 | i0 | 97.403 | 279.912621359223 | 308 | 8 | 99 | 0 | 2 | 309 | 1794 | 1487 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 86493 | 525 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii | |
| 10213602 | 10213602 | PRJDB9741_P_NODE_10829_length_200_cov_2.761589_g10512_i0 | PRJDB9741 | 10829 | 200 | 2.761589 | 5.523178 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 174 | 3.55e-39 | NTclustered | gi|2814788334|emb|OY762281.2| | 2026772 | g10512 | i0 | 82.828 | 199.695 | 198 | 30 | 98 | 4 | 1 | 196 | 978371 | 978176 | MAG: Opitutales bacterium isolate 685e4509-010e-4797-9872-a51ee4494a19 genome assembly, chromosome: 1 | blastn | 39939 | 174 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 10213759 | 10213759 | PRJDB9741_P_NODE_34789_length_163_cov_2.456140_g34472_i0 | PRJDB9741 | 34789 | 163 | 2.45614 | 4.0035082 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 183 | 4.62e-42 | NTclustered | gi|2814788334|emb|OY762281.2| | 2026772 | g34472 | i0 | 89.116 | 30.1411042944785 | 147 | 16 | 90 | 0 | 1 | 147 | 977994 | 978140 | MAG: Opitutales bacterium isolate 685e4509-010e-4797-9872-a51ee4494a19 genome assembly, chromosome: 1 | blastn | 4913 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 11488912 | 11488912 | PRJDB9741_P_NODE_3110_length_393_cov_3.011628_g2795_i0 | PRJDB9741 | 3110 | 393 | 3.011628 | 11.83569804 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 204 | 9.809999999999999e-48 | NTclustered | gi|2518556548|emb|OX638380.1| | 412056 | g2795 | i0 | 77.143 | 7.53180661577608 | 385 | 67 | 95 | 16 | 14 | 387 | 3920796 | 3921170 | MAG: uncultured Verrucomicrobiae bacterium isolate efd5e50e-5b6a-4a0f-a0a2-e496bae301b3 genome assembly, chromosome: 1 | blastn | 2960 | 204 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 12764516 | 12764516 | PRJDB9741_P_NODE_3191_length_386_cov_2.225519_g2876_i0 | PRJDB9741 | 3191 | 386 | 2.225519 | 8.59050334 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 625 | 1.7299999999999996e-174 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g2876 | i0 | 95.855 | 239.422279792746 | 386 | 16 | 100 | 0 | 1 | 386 | 575 | 190 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 92417 | 625 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 15313147 | 15313147 | PRJDB9741_P_NODE_32013_length_165_cov_0.879310_g31696_i0 | PRJDB9741 | 32013 | 165 | 0.87931 | 1.4508615 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 278 | 2.09e-70 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g31696 | i0 | 96.97 | 121.133333333333 | 165 | 5 | 100 | 0 | 1 | 165 | 1010102 | 1010266 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 19987 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 16284408 | 16284408 | PRJDB9741_P_NODE_11473_length_198_cov_1.731544_g11156_i0 | PRJDB9741 | 11473 | 198 | 1.731544 | 3.42845712 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 357 | 3.25e-94 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g11156 | i0 | 99.49 | 110.560606060606 | 196 | 1 | 99 | 0 | 2 | 197 | 1547 | 1352 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 21891 | 359 | 0.994428969359331 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 19136508 | 19136508 | PRJDB9741_P_NODE_36636_length_163_cov_0.842105_g36319_i0 | PRJDB9741 | 36636 | 163 | 0.842105 | 1.37263115 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 230 | 5.8499999999999985e-56 | NTclustered | gi|2874254040|emb|OY970364.1| | 412056 | g36319 | i0 | 92.638 | 117.319018404908 | 163 | 7 | 100 | 5 | 1 | 163 | 2167752 | 2167909 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04463.bin.c.15 genome assembly, chromosome: 1 | blastn | 19123 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 27221947 | 27221947 | PRJDB9741_P_NODE_20083_length_178_cov_1.193798_g19766_i0 | PRJDB9741 | 20083 | 178 | 1.193798 | 2.12496044 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 62 | 2.42e-9 | NR | HEV7404525.1 | 2811408 | g19766 | i0 | 55.2 | 0.97752808988764 | 58 | 26 | 97.8 | 0 | 176 | 3 | 586 | 643 | HEV7404525.1 DUF1549 domain-containing protein [Chthoniobacteraceae bacterium] | diamond | 174 | 62 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 27790797 | 27790797 | PRJDB9741_P_NODE_26904_length_167_cov_2.050847_g26587_i0 | PRJDB9741 | 26904 | 167 | 2.050847 | 3.42491449 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 51.6 | 9.9e-6 | NR | MBK8092153.1 | 2026800 | g26587 | i0 | 87.1 | 0.55688622754491 | 31 | 4 | 55.7 | 0 | 75 | 167 | 630 | 660 | MBK8092153.1 protein kinase [Verrucomicrobiaceae bacterium] | diamond | 93 | 51.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28864130 | 28864130 | PRJDB9741_P_NODE_42428_length_154_cov_3.523810_g42111_i0 | PRJDB9741 | 42428 | 154 | 3.52381 | 5.4266674 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 40.4 | 0.0342 | NR | HEX3730387.1 | 2006848 | g42111 | i0 | 34.7 | 0.954545454545455 | 49 | 31 | 95.5 | 1 | 8 | 154 | 8 | 55 | HEX3730387.1 hypothetical protein [Opitutaceae bacterium] | diamond | 147 | 40.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 29053760 | 29053760 | PRJDB9741_P_NODE_13848_length_189_cov_1.107143_g13531_i0 | PRJDB9741 | 13848 | 189 | 1.107143 | 2.09250027 | Opitutus sp. | 1913982 | Bacteria | Bacteria | 43.9 | 0.00709 | NR | MBA3849253.1 | 1913982 | g13531 | i0 | 40.7 | 2.73015873015873 | 59 | 35 | 93.7 | 0 | 179 | 3 | 325 | 383 | MBA3849253.1 sugar tyrosine-protein kinase [Opitutus sp.] | diamond | 516 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 30506522 | 30506522 | PRJDB9741_P_NODE_30553_length_166_cov_0.871795_g30236_i0 | PRJDB9741 | 30553 | 166 | 0.871795 | 1.4471797 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 75.1 | 2.62e-14 | NR | MEN9402104.1 | 2026799 | g30236 | i0 | 69.8 | 1.8433734939759 | 53 | 16 | 95.8 | 0 | 161 | 3 | 147 | 199 | MEN9402104.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 306 | 75.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31169729 | 31169729 | PRJDB9741_P_NODE_27595_length_167_cov_0.864407_g27278_i0 | PRJDB9741 | 27595 | 167 | 0.864407 | 1.44355969 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 50.1 | 3.45e-5 | NR | HUL54344.1 | 2006848 | g27278 | i0 | 70.4 | 0.48502994011976 | 27 | 8 | 48.5 | 0 | 85 | 165 | 8 | 34 | HUL54344.1 phosphoenolpyruvate carboxykinase (GTP) [Opitutaceae bacterium] | diamond | 81 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 32119056 | 32119056 | PRJDB9741_P_NODE_19518_length_179_cov_1.176923_g19201_i0 | PRJDB9741 | 19518 | 179 | 1.176923 | 2.10669217 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 92.4 | 1.34e-20 | NR | HUR41831.1 | 2499141 | g19201 | i0 | 78 | 4.94413407821229 | 59 | 13 | 98.9 | 0 | 1 | 177 | 214 | 272 | HUR41831.1 malate dehydrogenase [Verrucomicrobiia bacterium] | diamond | 885 | 92.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 32213926 | 32213926 | PRJDB9741_P_NODE_25318_length_170_cov_1.247934_g25001_i0 | PRJDB9741 | 25318 | 170 | 1.247934 | 2.1214878 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 87 | 3.41e-18 | NR | MCE2862490.1 | 2006848 | g25001 | i0 | 69.8 | 2.82352941176471 | 53 | 16 | 93.5 | 0 | 6 | 164 | 242 | 294 | MCE2862490.1 sialate O-acetylesterase [Opitutaceae bacterium] | diamond | 480 | 87 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;