RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB9741", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Peploviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJDB9741 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7359485 7359485 PRJDB9741_P_NODE_2366_length_480_cov_3.013921_g2052_i0 PRJDB9741 2366 480 3.013921 14.4668208 root 1 Root_unresolved Root_unresolved 808 0   NTclustered gi|2549600182|gb|OQ724865.1| 10298 g2052 i0 96.115 101.979166666667 489 10 100 1 1 480 46248 46736 Human alphaherpesvirus 1 strain BP-C12, complete genome blastn 48950 808 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
11185154 11185154 PRJDB9741_P_NODE_3089_length_395_cov_2.916185_g2774_i0 PRJDB9741 3089 395 2.916185 11.518930750000001 root 1 Root_unresolved Root_unresolved 730 0   NTclustered gi|1519305892|dbj|AP019128.1| 10376 g2774 i0 100 101.956962025316 395 0 100 0 1 395 95287 95681 Human gammaherpesvirus 4 UPN326_PBMC DNA, nearly complete genome blastn 40273 730 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
16284485 16284485 PRJDB9741_P_NODE_31393_length_165_cov_1.318966_g31076_i0 PRJDB9741 31393 165 1.318966 2.1762939 root 1 Root_unresolved Root_unresolved 305 9.59e-79   NTclustered gi|1997760576|emb|LT907985.2| 10359 g31076 i0 100 100 165 0 100 0 1 165 174954 174790 Human betaherpesvirus 5 isolate Towne genome assembly, chromosome: 1 blastn 16500 305 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;