RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB9741" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB9741 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28990782 28990782 PRJDB9741_P_NODE_32368_length_165_cov_0.879310_g32051_i0 PRJDB9741 32368 165 0.87931 1.4508615 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 62 2.12e-9   NR MDY3228840.1 2212473 g32051 i0 64.8 0.981818181818182 54 17 98.2 1 4 165 334 385 MDY3228840.1 S8 family serine peptidase [Kiritimatiellia bacterium] diamond 162 62 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31037937 31037937 PRJDB9741_P_NODE_9575_length_210_cov_2.608696_g9258_i0 PRJDB9741 9575 210 2.608696 5.4782616 Pseudomonadati 3379134 Bacteria Bacteria 62.4 2.74e-10   NR MFA7175497.1 2212473 g9258 i0 70.7 1.17142857142857 41 12 58.6 0 3 125 2 42 MFA7175497.1 DNA polymerase [Kiritimatiellia bacterium] diamond 246 62.4 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;