contig_metadata
15 rows where bioproject = "PRJDB9741" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2560832 | 2560832 | PRJDB9741_P_NODE_36743_length_162_cov_2.504425_g36426_i0 | PRJDB9741 | 36743 | 162 | 2.504425 | 4.0571685 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 156 | 9.99e-34 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g36426 | i0 | 84.337 | 64.1358024691358 | 166 | 19 | 99 | 6 | 2 | 162 | 3042320 | 3042483 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 10390 | 156 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 3532451 | 3532451 | PRJDB9741_P_NODE_20523_length_177_cov_1.445312_g20206_i0 | PRJDB9741 | 20523 | 177 | 1.445312 | 2.55820224 | Gemmatirosa | 1706036 | Bacteria | Bacteria | 272 | 1.0499999999999998e-68 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g20206 | i0 | 94.413 | 10.2372881355932 | 179 | 6 | 100 | 4 | 1 | 177 | 421805 | 421629 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 1812 | 272 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 6084965 | 6084965 | PRJDB9741_P_NODE_30945_length_165_cov_1.758621_g30628_i0 | PRJDB9741 | 30945 | 165 | 1.758621 | 2.90172465 | Gemmatirosa | 1706036 | Bacteria | Bacteria | 279 | 5.81e-71 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g30628 | i0 | 97.546 | 169.939393939394 | 163 | 4 | 99 | 0 | 3 | 165 | 423137 | 423299 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 28040 | 279 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10213729 | 10213729 | PRJDB9741_P_NODE_30669_length_165_cov_3.560345_g30352_i0 | PRJDB9741 | 30669 | 165 | 3.560345 | 5.87456925 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 267 | 4.53e-67 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g30352 | i0 | 95.758 | 9.33939393939394 | 165 | 7 | 100 | 0 | 1 | 165 | 421743 | 421907 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 1541 | 267 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 12764552 | 12764552 | PRJDB9741_P_NODE_37311_length_162_cov_1.451327_g36994_i0 | PRJDB9741 | 37311 | 162 | 1.451327 | 2.35114974 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 228 | 2.0899999999999995e-55 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g36994 | i0 | 92.025 | 213.086419753086 | 163 | 11 | 100 | 2 | 1 | 162 | 1902932 | 1903093 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 34520 | 228 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14039153 | 14039153 | PRJDB9741_P_NODE_7112_length_235_cov_1.774194_g6795_i0 | PRJDB9741 | 7112 | 235 | 1.774194 | 4.1693559 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 296 | 8.81e-76 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g6795 | i0 | 89.362 | 41.9659574468085 | 235 | 25 | 100 | 0 | 1 | 235 | 3042850 | 3043084 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 9862 | 296 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 16587950 | 16587950 | PRJDB9741_P_NODE_7694_length_226_cov_3.000000_g7377_i0 | PRJDB9741 | 7694 | 226 | 3 | 6.78 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 385 | 1.75e-102 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g7377 | i0 | 97.368 | 14.7079646017699 | 228 | 2 | 100 | 4 | 1 | 226 | 1102886 | 1102661 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 3324 | 385 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 17862915 | 17862915 | PRJDB9741_P_NODE_8555_length_216_cov_1.221557_g8238_i0 | PRJDB9741 | 8555 | 216 | 1.221557 | 2.63856312 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 294 | 2.87e-75 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g8238 | i0 | 95.652 | 48.9768518518519 | 184 | 7 | 85 | 1 | 32 | 215 | 801715 | 801897 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 10579 | 294 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 19136317 | 19136317 | PRJDB9741_P_NODE_13416_length_189_cov_2.378571_g13099_i0 | PRJDB9741 | 13416 | 189 | 2.378571 | 4.49549919 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 344 | 2.39e-90 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g13099 | i0 | 99.471 | 422.47619047619 | 189 | 1 | 100 | 0 | 1 | 189 | 171714 | 171902 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 79848 | 344 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 20411602 | 20411602 | PRJDB9741_P_NODE_33457_length_164_cov_1.321739_g33140_i0 | PRJDB9741 | 33457 | 164 | 1.321739 | 2.16765196 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 213 | 5.94e-51 | NTclustered | gi|575462059|gb|CP007130.1| | 861299 | g33140 | i0 | 91.083 | 84.6524390243902 | 157 | 14 | 96 | 0 | 1 | 157 | 746431 | 746587 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence | blastn | 13883 | 213 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 20411634 | 20411634 | PRJDB9741_P_NODE_3697_length_347_cov_2.590604_g3381_i0 | PRJDB9741 | 3697 | 347 | 2.590604 | 8.98939588 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 409 | 1.69e-109 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g3381 | i0 | 89.506 | 96.6974063400576 | 324 | 33 | 93 | 1 | 25 | 347 | 421037 | 421360 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 33554 | 409 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 28132169 | 28132169 | PRJDB9741_P_NODE_25185_length_170_cov_1.421488_g24868_i0 | PRJDB9741 | 25185 | 170 | 1.421488 | 2.4165296 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 86.7 | 3.56e-18 | NR | HEU4699496.1 | 2448054 | g24868 | i0 | 67.9 | 7.58823529411765 | 56 | 18 | 98.8 | 0 | 2 | 169 | 368 | 423 | HEU4699496.1 acetyl-CoA hydrolase/transferase C-terminal domain-containing protein [Gemmatimonadales bacterium] | diamond | 1290 | 86.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 31201134 | 31201134 | PRJDB9741_P_NODE_20395_length_177_cov_1.593750_g20078_i0 | PRJDB9741 | 20395 | 177 | 1.59375 | 2.8209375 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 72 | 7.12e-13 | NR | HUF75775.1 | 2910168 | g20078 | i0 | 63.8 | 0.983050847457627 | 58 | 21 | 98.3 | 0 | 175 | 2 | 245 | 302 | HUF75775.1 adenylate/guanylate cyclase domain-containing protein [Longimicrobiales bacterium] | diamond | 174 | 72 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 31675880 | 31675880 | PRJDB9741_P_NODE_23097_length_173_cov_1.370968_g22780_i0 | PRJDB9741 | 23097 | 173 | 1.370968 | 2.37177464 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 98.6 | 8.82e-24 | NR | HUP89793.1 | 2910168 | g22780 | i0 | 85.5 | 0.953757225433526 | 55 | 8 | 95.4 | 0 | 1 | 165 | 27 | 81 | HUP89793.1 succinate dehydrogenase cytochrome b subunit [Longimicrobiales bacterium] | diamond | 165 | 98.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 31865566 | 31865566 | PRJDB9741_P_NODE_26177_length_168_cov_2.277311_g25860_i0 | PRJDB9741 | 26177 | 168 | 2.277311 | 3.82588248 | Gemmatirosa sp. | 2510638 | Bacteria | Bacteria | 65.1 | 2.32e-11 | NR | HZF67424.1 | 2510638 | g25860 | i0 | 82.1 | 0.696428571428571 | 39 | 7 | 69.6 | 0 | 117 | 1 | 1 | 39 | HZF67424.1 hypothetical protein [Gemmatirosa sp.] | diamond | 117 | 65.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;