contig_metadata
17 rows where bioproject = "PRJDB9741", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2560696 | 2560696 | PRJDB9741_P_NODE_16843_length_183_cov_1.888060_g16526_i0 | PRJDB9741 | 16843 | 183 | 1.88806 | 3.4551498 | Syntrophorhabdaceae bacterium | 2660714 | Bacteria | Bacteria | 200 | 5.259999999999999e-47 | NTclustered | gi|2621704922|emb|OY762209.1| | 2660714 | g16526 | i0 | 86.486 | 165.852459016393 | 185 | 21 | 100 | 4 | 1 | 183 | 3508622 | 3508440 | MAG: Syntrophorhabdaceae bacterium isolate b67c53bf-795e-48b1-b0c8-2f1cb1e3683a genome assembly, chromosome: 1 | blastn | 30351 | 200 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophorhabdia | Syntrophorhabdales | Syntrophorhabdaceae | Syntrophorhabdaceae bacterium | |||
| 6389085 | 6389085 | PRJDB9741_P_NODE_20166_length_177_cov_3.625000_g19849_i0 | PRJDB9741 | 20166 | 177 | 3.625 | 6.41625 | Pelobacter propionicus | 29543 | Bacteria | Bacteria | 152 | 1.43e-32 | NTclustered | gi|118501159|gb|CP000482.1| | 338966 | g19849 | i0 | 82.286 | 0.988700564971751 | 175 | 31 | 99 | 0 | 3 | 177 | 3478850 | 3478676 | Pelobacter propionicus DSM 2379, complete genome | blastn | 175 | 152 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Pelobacter | Pelobacter propionicus | ||
| 14039175 | 14039175 | PRJDB9741_P_NODE_9512_length_210_cov_2.701863_g9195_i0 | PRJDB9741 | 9512 | 210 | 2.701863 | 5.6739123 | Syntrophales bacterium | 2928017 | Bacteria | Bacteria | 104 | 5.02e-18 | NTclustered | gi|2621706256|emb|OY764159.1| | 2928017 | g9195 | i0 | 85.577 | 6.5 | 104 | 9 | 47 | 4 | 1 | 98 | 1469682 | 1469579 | MAG: Syntrophales bacterium isolate 28fc5764-0b9a-428c-a12f-8ca866e14e1d genome assembly, chromosome: 1 | blastn | 1365 | 104 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophales bacterium | ||||
| 17862869 | 17862869 | PRJDB9741_P_NODE_4555_length_302_cov_2.596838_g4239_i0 | PRJDB9741 | 4555 | 302 | 2.596838 | 7.84245076 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 206 | 2.04e-48 | NTclustered | gi|2556892445|gb|CP129479.1| | 2202153 | g4239 | i0 | 79.605 | 76.205298013245 | 304 | 48 | 99 | 13 | 5 | 302 | 886541 | 886836 | MAG: Thermodesulfobacteriota bacterium isolate cMAG.17 chromosome, complete genome | blastn | 23014 | 206 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 20411426 | 20411426 | PRJDB9741_P_NODE_10317_length_205_cov_1.564103_g10000_i0 | PRJDB9741 | 10317 | 205 | 1.564103 | 3.20641115 | Desulfolutivibrio sulfoxidireducens | 2773299 | Bacteria | Bacteria | 58.4 | 3.85e-4 | NTclustered | gi|1863429635|gb|CP045508.1| | 2773299 | g10000 | i0 | 100 | 1.06829268292683 | 31 | 0 | 15 | 0 | 95 | 125 | 3214337 | 3214307 | Desulfolutivibrio sulfoxidireducens strain DSM 107105 chromosome, complete genome | blastn | 219 | 58.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfolutivibrio | Desulfolutivibrio sulfoxidireducens | ||
| 21687504 | 21687504 | PRJDB9741_P_NODE_28118_length_167_cov_0.864407_g27801_i0 | PRJDB9741 | 28118 | 167 | 0.864407 | 1.44355969 | Geomonas subterranea | 2847989 | Bacteria | Bacteria | 86.1 | 1.38e-12 | NTclustered | gi|2060227305|gb|CP077683.1| | 2847989 | g27801 | i0 | 93.103 | 0.694610778443114 | 58 | 4 | 35 | 0 | 109 | 166 | 473488 | 473545 | Geomonas subterranea strain RG2 chromosome, complete genome | blastn | 116 | 86.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas subterranea | ||
| 21687625 | 21687625 | PRJDB9741_P_NODE_41698_length_157_cov_2.518519_g41381_i0 | PRJDB9741 | 41698 | 157 | 2.518519 | 3.95407483 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 94 | 1.04e-20 | NR | MEA5114808.1 | 2282154 | g41381 | i0 | 88.5 | 0.993630573248408 | 52 | 6 | 99.4 | 0 | 156 | 1 | 3 | 54 | MEA5114808.1 KUP/HAK/KT family potassium transporter [Geobacteraceae bacterium] | diamond | 156 | 94 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 27696283 | 27696283 | PRJDB9741_P_NODE_34704_length_163_cov_3.035088_g34387_i0 | PRJDB9741 | 34704 | 163 | 3.035088 | 4.94719344 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 94 | 1.13e-20 | NR | MEA5114581.1 | 2282154 | g34387 | i0 | 87 | 0.993865030674847 | 54 | 7 | 99.4 | 0 | 1 | 162 | 74 | 127 | MEA5114581.1 M3 family oligoendopeptidase [Geobacteraceae bacterium] | diamond | 162 | 94 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 27885368 | 27885368 | PRJDB9741_P_NODE_18525_length_180_cov_2.427481_g18208_i0 | PRJDB9741 | 18525 | 180 | 2.4274810000000002 | 4.3694658 | Geobacter sp. | 46610 | Bacteria | Bacteria | 102 | 7.98e-24 | NR | RII26998.1 | 46610 | g18208 | i0 | 74.6 | 1.96666666666667 | 59 | 15 | 98.3 | 0 | 3 | 179 | 114 | 172 | RII26998.1 MAG: hypothetical protein CXR31_06965 [Geobacter sp.] | diamond | 354 | 102 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. | ||
| 28011911 | 28011911 | PRJDB9741_P_NODE_41905_length_156_cov_2.785047_g41588_i0 | PRJDB9741 | 41905 | 156 | 2.785047 | 4.34467332 | Pelobacter propionicus | 29543 | Bacteria | Bacteria | 73.9 | 6.93e-14 | NR | WP_011736280.1 | 29543 | g41588 | i0 | 63.5 | 1.96153846153846 | 52 | 19 | 100 | 0 | 156 | 1 | 201 | 252 | WP_011736280.1 type IV pilus biogenesis protein PilM [Pelobacter propionicus] | diamond | 306 | 73.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Pelobacter | Pelobacter propionicus | ||
| 28295765 | 28295765 | PRJDB9741_P_NODE_20786_length_176_cov_2.874016_g20469_i0 | PRJDB9741 | 20786 | 176 | 2.874016 | 5.05826816 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 112 | 8.9e-28 | NR | MBL0224796.1 | 2282154 | g20469 | i0 | 87.9 | 5.93181818181818 | 58 | 7 | 98.9 | 0 | 2 | 175 | 219 | 276 | MBL0224796.1 branched-chain amino acid ABC transporter substrate-binding protein [Geobacteraceae bacterium] | diamond | 1044 | 112 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 28353012 | 28353012 | PRJDB9741_P_NODE_24066_length_171_cov_2.221311_g23749_i0 | PRJDB9741 | 24066 | 171 | 2.221311 | 3.79844181 | Geobacter | 28231 | Bacteria | Bacteria | 98.6 | 5.2599999999999997e-23 | NR | RQW88116.1 | 46610 | g23749 | i0 | 78.6 | 2.85964912280702 | 56 | 12 | 98.2 | 0 | 169 | 2 | 9 | 64 | RQW88116.1 MAG: peptidoglycan-binding protein [Geobacter sp.] | diamond | 489 | 99.4 | 0.991951710261569 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. | ||
| 28927321 | 28927321 | PRJDB9741_P_NODE_21268_length_176_cov_1.259843_g20951_i0 | PRJDB9741 | 21268 | 176 | 1.259843 | 2.21732368 | Desulfoprunum benzoelyticum | 1506996 | Bacteria | Bacteria | 117 | 1.06e-28 | NR | WP_183350515.1 | 1506996 | g20951 | i0 | 93.1 | 0.988636363636364 | 58 | 4 | 98.9 | 0 | 2 | 175 | 621 | 678 | WP_183350515.1 AAA family ATPase [Desulfoprunum benzoelyticum] | diamond | 174 | 117 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfoprunum | Desulfoprunum benzoelyticum | ||
| 29400910 | 29400910 | PRJDB9741_P_NODE_18309_length_181_cov_1.303030_g17992_i0 | PRJDB9741 | 18309 | 181 | 1.30303 | 2.3584843 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 125 | 1.13e-32 | NR | MEA5115453.1 | 2282154 | g17992 | i0 | 95 | 0.994475138121547 | 60 | 3 | 99.4 | 0 | 1 | 180 | 241 | 300 | MEA5115453.1 sorbosone dehydrogenase family protein [Geobacteraceae bacterium] | diamond | 180 | 125 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 29463693 | 29463693 | PRJDB9741_P_NODE_34510_length_164_cov_0.886957_g34193_i0 | PRJDB9741 | 34510 | 164 | 0.886957 | 1.45460948 | Desulfuromonadales bacterium | 2099678 | Bacteria | Bacteria | 92.4 | 3.96e-20 | NR | NVN92419.1 | 2099678 | g34193 | i0 | 87 | 2.96341463414634 | 54 | 7 | 98.8 | 0 | 163 | 2 | 206 | 259 | NVN92419.1 TIGR04442 family protein [Desulfuromonadales bacterium] | diamond | 486 | 92.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadales bacterium | ||||
| 29842991 | 29842991 | PRJDB9741_P_NODE_30271_length_166_cov_0.871795_g29954_i0 | PRJDB9741 | 30271 | 166 | 0.871795 | 1.4471797 | Candidatus Desulfovibrio intestinipullorum | 2838536 | Bacteria | Bacteria | 121 | 7.43e-32 | NR | HIW01641.1 | 2838536 | g29954 | i0 | 100 | 0.975903614457831 | 54 | 0 | 97.6 | 0 | 164 | 3 | 201 | 254 | HIW01641.1 ATP-binding protein [Candidatus Desulfovibrio intestinipullorum] | diamond | 162 | 121 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Candidatus Desulfovibrio intestinipullorum | ||
| 30343065 | 30343065 | PRJDB9741_P_NODE_30592_length_166_cov_0.871795_g30275_i0 | PRJDB9741 | 30592 | 166 | 0.871795 | 1.4471797 | Bacteria | 2 | Bacteria | Bacteria | 72 | 2.77e-13 | NR | WP_011735917.1 | 29543 | g30275 | i0 | 64 | 4.62650602409639 | 50 | 17 | 90.4 | 1 | 159 | 10 | 97 | 145 | WP_011735917.1 SIR2 family NAD-dependent protein deacylase [Pelobacter propionicus] | diamond | 768 | 72 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Pelobacter | Pelobacter propionicus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;