contig_metadata
19 rows where bioproject = "PRJDB9741", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 981833 | 981833 | PRJDB9741_P_NODE_34521_length_164_cov_0.886957_g34204_i0 | PRJDB9741 | 34521 | 164 | 0.886957 | 1.45460948 | Bdellovibrio | 958 | Bacteria | Bacteria | 215 | 1.65e-51 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g34204 | i0 | 90.244 | 7.67682926829268 | 164 | 16 | 100 | 0 | 1 | 164 | 664222 | 664385 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 1259 | 215 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 2560804 | 2560804 | PRJDB9741_P_NODE_32703_length_164_cov_3.373913_g32386_i0 | PRJDB9741 | 32703 | 164 | 3.373913 | 5.53321732 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 294 | 2.06e-75 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g32386 | i0 | 99.383 | 118.65243902439 | 162 | 1 | 99 | 0 | 1 | 162 | 1292811 | 1292650 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 19459 | 294 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 3532565 | 3532565 | PRJDB9741_P_NODE_8083_length_221_cov_2.366279_g7766_i0 | PRJDB9741 | 8083 | 221 | 2.366279 | 5.22947659 | Bdellovibrio | 958 | Bacteria | Bacteria | 375 | 1.0199999999999998e-99 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g7766 | i0 | 97.285 | 86.9773755656109 | 221 | 6 | 100 | 0 | 1 | 221 | 784641 | 784421 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 19222 | 375 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 14039060 | 14039060 | PRJDB9741_P_NODE_36732_length_162_cov_2.584071_g36415_i0 | PRJDB9741 | 36732 | 162 | 2.584071 | 4.18619502 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 100 | 2.37e-25 | NR | PZP56992.1 | 349221 | g36415 | i0 | 90.6 | 0.981481481481482 | 53 | 5 | 98.1 | 0 | 162 | 4 | 85 | 137 | PZP56992.1 MAG: 30S ribosomal protein S11 [Micavibrio aeruginosavorus] | diamond | 159 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 15009730 | 15009730 | PRJDB9741_P_NODE_34212_length_164_cov_0.886957_g33895_i0 | PRJDB9741 | 34212 | 164 | 0.886957 | 1.45460948 | Bacteria | 2 | Bacteria | Bacteria | 91.7 | 6.81e-20 | NR | MBL7687417.1 | 2026715 | g33895 | i0 | 85.2 | 1.97560975609756 | 54 | 8 | 98.8 | 0 | 2 | 163 | 330 | 383 | MBL7687417.1 polyribonucleotide nucleotidyltransferase [Pseudobdellovibrionaceae bacterium] | diamond | 324 | 91.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 16284449 | 16284449 | PRJDB9741_P_NODE_2213_length_502_cov_6.028698_g1900_i0 | PRJDB9741 | 2213 | 502 | 6.028698 | 30.26406396 | Bdellovibrio | 958 | Bacteria | Bacteria | 582 | 1.4099999999999996e-161 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g1900 | i0 | 87.795 | 241.474103585657 | 508 | 49 | 99 | 12 | 2 | 502 | 2950431 | 2949930 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 121220 | 582 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 17862632 | 17862632 | PRJDB9741_P_NODE_12915_length_190_cov_2.390071_g12598_i0 | PRJDB9741 | 12915 | 190 | 2.390071 | 4.5411349 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 335 | 1.4499999999999993e-87 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g12598 | i0 | 98.421 | 4.62631578947368 | 190 | 3 | 100 | 0 | 1 | 190 | 512329 | 512140 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 879 | 335 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 17862705 | 17862705 | PRJDB9741_P_NODE_22235_length_174_cov_1.632000_g21918_i0 | PRJDB9741 | 22235 | 174 | 1.632 | 2.83968 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 294 | 2.1999999999999998e-75 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g21918 | i0 | 97.126 | 128.425287356322 | 174 | 5 | 100 | 0 | 1 | 174 | 1292273 | 1292446 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 22346 | 294 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 17862759 | 17862759 | PRJDB9741_P_NODE_2975_length_408_cov_3.977716_g2660_i0 | PRJDB9741 | 2975 | 408 | 3.977716 | 16.22908128 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 649 | 0 | NTclustered | gi|2800914199|gb|CP168971.1| | 959 | g2660 | i0 | 95.343 | 192.28921568627501 | 408 | 19 | 100 | 0 | 1 | 408 | 750758 | 750351 | Bdellovibrio bacteriovorus strain Bd16 chromosome, complete genome | blastn | 78454 | 649 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 20108317 | 20108317 | PRJDB9741_P_NODE_18256_length_181_cov_1.416667_g17939_i0 | PRJDB9741 | 18256 | 181 | 1.416667 | 2.56416727 | Bdellovibrio | 958 | Bacteria | Bacteria | 329 | 6.340000000000001e-86 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g17939 | i0 | 99.448 | 89.4254143646409 | 181 | 1 | 100 | 0 | 1 | 181 | 2949231 | 2949051 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 16186 | 329 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 20108447 | 20108447 | PRJDB9741_P_NODE_9076_length_210_cov_5.385093_g8759_i0 | PRJDB9741 | 9076 | 210 | 5.385093 | 11.3086953 | Bdellovibrio | 958 | Bacteria | Bacteria | 185 | 1.74e-42 | NTclustered | gi|2663425168|dbj|AP029173.1| | 3113893 | g8759 | i0 | 100 | 2.82857142857143 | 100 | 0 | 94 | 0 | 1 | 100 | 3475981 | 3475882 | Bdellovibrio sp. CKG001 DNA, complete genome | blastn | 594 | 185 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. CKG001 | ||
| 22658925 | 22658925 | PRJDB9741_P_NODE_7038_length_236_cov_2.700535_g6721_i0 | PRJDB9741 | 7038 | 236 | 2.700535 | 6.3732626 | Peredibacter | 263370 | Bacteria | Bacteria | 363 | 8.609999999999998e-96 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g6721 | i0 | 94.468 | 270.021186440678 | 235 | 13 | 99 | 0 | 2 | 236 | 511892 | 512126 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 63725 | 363 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 25207925 | 25207925 | PRJDB9741_P_NODE_22260_length_174_cov_1.632000_g21943_i0 | PRJDB9741 | 22260 | 174 | 1.632 | 2.83968 | Bdellovibrio | 958 | Bacteria | Bacteria | 322 | 1.01e-83 | NTclustered | gi|2663428595|dbj|AP029174.1| | 3113894 | g21943 | i0 | 100 | 4.00574712643678 | 174 | 0 | 100 | 0 | 1 | 174 | 308648 | 308821 | Bdellovibrio sp. HM001 DNA, complete genome | blastn | 697 | 322 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HM001 | ||
| 25208028 | 25208028 | PRJDB9741_P_NODE_7860_length_224_cov_1.760000_g7543_i0 | PRJDB9741 | 7860 | 224 | 1.76 | 3.9424 | Peredibacter | 263370 | Bacteria | Bacteria | 385 | 1.73e-102 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g7543 | i0 | 97.758 | 177.633928571429 | 223 | 5 | 99 | 0 | 1 | 223 | 512340 | 512562 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 39790 | 385 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 26620961 | 26620961 | PRJDB9741_P_NODE_28201_length_167_cov_0.864407_g27884_i0 | PRJDB9741 | 28201 | 167 | 0.864407 | 1.44355969 | Bdellovibrio sp. ArHS | 1569284 | Bacteria | Bacteria | 58.9 | 2.58e-8 | NR | WP_041875954.1 | 1569284 | g27884 | i0 | 100 | 0.413173652694611 | 23 | 0 | 41.3 | 0 | 99 | 167 | 416 | 438 | WP_041875954.1 catalase/peroxidase HPI [Bdellovibrio sp. ArHS] | diamond | 69 | 58.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. ArHS | ||
| 29274491 | 29274491 | PRJDB9741_P_NODE_18809_length_180_cov_1.496183_g18492_i0 | PRJDB9741 | 18809 | 180 | 1.496183 | 2.6931294 | Bdellovibrio svalbardensis | 2972972 | Bacteria | Bacteria | 87.4 | 2.96e-18 | NR | WP_277576255.1 | 2972972 | g18492 | i0 | 65 | 1 | 60 | 21 | 100 | 0 | 1 | 180 | 311 | 370 | WP_277576255.1 hypothetical protein [Bdellovibrio svalbardensis] | diamond | 180 | 87.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio svalbardensis | ||
| 29653201 | 29653201 | PRJDB9741_P_NODE_17170_length_183_cov_1.208955_g16853_i0 | PRJDB9741 | 17170 | 183 | 1.208955 | 2.21238765 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 68.9 | 9.64e-12 | NR | HMN67505.1 | 2053517 | g16853 | i0 | 85.7 | 0.573770491803279 | 35 | 5 | 57.4 | 0 | 183 | 79 | 399 | 433 | HMN67505.1 translational GTPase TypA [Bdellovibrionales bacterium] | diamond | 105 | 68.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31454665 | 31454665 | PRJDB9741_P_NODE_35876_length_163_cov_0.894737_g35559_i0 | PRJDB9741 | 35876 | 163 | 0.894737 | 1.45842131 | Bacteriovorax antarcticus | 3088717 | Bacteria | Bacteria | 93.2 | 3.4e-21 | NR | WP_323578651.1 | 3088717 | g35559 | i0 | 82.7 | 0.957055214723926 | 52 | 9 | 95.7 | 0 | 6 | 161 | 218 | 269 | WP_323578651.1 trypsin-like serine peptidase [Bacteriovorax antarcticus] | diamond | 156 | 93.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax antarcticus | ||
| 32435636 | 32435636 | PRJDB9741_P_NODE_33519_length_164_cov_0.947826_g33202_i0 | PRJDB9741 | 33519 | 164 | 0.947826 | 1.55443464 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 67.4 | 1.02e-11 | NR | HEY8278642.1 | 3034175 | g33202 | i0 | 62.3 | 0.969512195121951 | 53 | 20 | 97 | 0 | 2 | 160 | 183 | 235 | HEY8278642.1 RsmE family RNA methyltransferase [Bdellovibrionota bacterium] | diamond | 159 | 67.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;