RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB9741", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJDB9741 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27853798 27853798 PRJDB9741_P_NODE_39485_length_161_cov_1.232143_g39168_i0 PRJDB9741 39485 161 1.232143 1.98375023 Paraphysoderma sedebokerense 1500003 Fungi Fungi 69.3 1.23e-13   NR KAI9137792.1 1500003 g39168 i0 67.3 0.91304347826087 49 16 91.3 0 151 5 4 52 KAI9137792.1 ribosomal protein L36e [Paraphysoderma sedebokerense] diamond 147 69.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
28106288 28106288 PRJDB9741_P_NODE_13065_length_190_cov_1.531915_g12748_i0 PRJDB9741 13065 190 1.531915 2.9106385 Catenaria anguillulae PL171 765915 Fungi Fungi 47.4 4.2e-4   NR ORZ31969.1 765915 g12748 i0 49 3.23684210526316 49 25 77.4 0 3 149 606 654 ORZ31969.1 chitin synthase-domain-containing protein [Catenaria anguillulae PL171] diamond 615 47.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;