RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB9741", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJDB9741 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3837247 3837247 PRJDB9741_P_NODE_6304_length_250_cov_2.567164_g5987_i0 PRJDB9741 6304 250 2.567164 6.41791 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 156 1.68e-33   NTclustered gi|294953686|ref|XM_002787842.1| 423536 g5987 i0 78.543 2 247 45 97 8 7 249 340 98 Perkinsus marinus ATCC 50983 40S ribosomal protein S6, putative, mRNA blastn 500 156 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
6389288 6389288 PRJDB9741_P_NODE_6666_length_243_cov_1.072165_g6349_i0 PRJDB9741 6666 243 1.072165 2.60536095 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 165 2.6999999999999997e-36   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g6349 i0 82.474 77.7736625514403 194 29 79 4 1 191 246 437 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 18899 165 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
16587925 16587925 PRJDB9741_P_NODE_5354_length_273_cov_1.464286_g5038_i0 PRJDB9741 5354 273 1.464286 3.99750078 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 105 3.24e-26   NR KAF4732395.1 32597 g5038 i0 61.1 5.93406593406593 90 35 98.9 0 2 271 110 199 KAF4732395.1 60S ribosomal protein L7A, partial [Perkinsus olseni] diamond 1620 105 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;