RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB9741", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJDB9741 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22962695 22962695 PRJDB9741_P_NODE_10619_length_202_cov_2.712418_g10302_i0 PRJDB9741 10619 202 2.712418 5.47908436 Candidatus Protochlamydia naegleriophila 389348 Bacteria Bacteria 368 1.54e-97   NTclustered gi|971146634|emb|LN879502.1| 389348 g10302 i0 99.505 181.787128712871 202 1 100 0 1 202 1249324 1249123 Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK blastn 36721 368 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia naegleriophila
28832527 28832527 PRJDB9741_P_NODE_26888_length_167_cov_2.135593_g26571_i0 PRJDB9741 26888 167 2.135593 3.56644031 Chlamydia ibidis 1405396 Bacteria Bacteria 45.8 5.95e-5   NR EPP35138.1 1405396 g26571 i0 64.7 0.610778443113772 34 12 61.1 0 12 113 2 35 EPP35138.1 hypothetical protein CP10139811_1290, partial [Chlamydia ibidis] diamond 102 45.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia ibidis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;