RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB9741", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJDB9741 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26779408 26779408 PRJDB9741_P_NODE_4581_length_301_cov_2.674603_g4265_i0 PRJDB9741 4581 301 2.674603 8.05055503 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 92 8.5e-21   NR XP_068360038.1 1144522 g4265 i0 50 3.78737541528239 94 47 93.7 0 298 17 84 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 1140 92 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28826429 28826429 PRJDB9741_P_NODE_37488_length_162_cov_0.902655_g37171_i0 PRJDB9741 37488 162 0.902655 1.4623011 root 1 Root_unresolved Root_unresolved 63.2 7.54e-10   NR BAC98826.1 63628 g37171 i0 63.3 3.85185185185185 49 18 90.7 0 14 160 134 182 BAC98826.1 enolase [Trichonympha agilis] diamond 624 63.2 1 Eukaryota Metamonada   Parabasalia   Trichonymphida Trichonymphidae Trichonympha Trichonympha agilis
32087282 32087282 PRJDB9741_P_NODE_26638_length_168_cov_1.285714_g26321_i0 PRJDB9741 26638 168 1.285714 2.15999952 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 41.6 0.0326   NR XP_068350105.1 1144522 g26321 i0 38 0.892857142857143 50 26 89.3 1 168 19 162 206 XP_068350105.1 Ras-related protein YPTC6 [Tritrichomonas foetus] diamond 150 41.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;