RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB9741", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJDB9741 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31169722 31169722 PRJDB9741_P_NODE_10235_length_206_cov_1.299363_g9918_i0 PRJDB9741 10235 206 1.299363 2.67668778 Giardia intestinalis 5741 Fornicata other_Eukaryota 46.6 9.83e-4   NR ESU43468.1 5741 g9918 i0 39.7 0.91747572815534 63 30 90.3 2 16 201 313 368 ESU43468.1 Variant-specific surface protein [Giardia intestinalis] diamond 189 46.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
31290363 31290363 PRJDB9741_P_NODE_42475_length_154_cov_2.914286_g42158_i0 PRJDB9741 42475 154 2.914286 4.48800044 Hexamitidae 5739 Fornicata other_Eukaryota 52.4 4.5e-7   NR TNJ30202.1 5742 g42158 i0 57.9 1.4025974025974 38 16 74 0 114 1 6 43 TNJ30202.1 Ribosomal protein S21 [Giardia muris] diamond 216 52.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;