RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB9741", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJDB9741 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2560859 2560859 PRJDB9741_P_NODE_39623_length_161_cov_0.910714_g39306_i0 PRJDB9741 39623 161 0.910714 1.46624954 Salinibacter ruber 146919 Bacteria Bacteria 76.8 7.94e-10   NTclustered gi|1419235469|gb|CP030716.1| 146919 g39306 i0 94 0.925465838509317 50 3 31 0 58 107 2970638 2970687 Salinibacter ruber strain P13 chromosome, complete genome blastn 149 76.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinibacter Salinibacter ruber
24236715 24236715 PRJDB9741_P_NODE_15500_length_186_cov_1.160584_g15183_i0 PRJDB9741 15500 186 1.160584 2.15868624 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 95.9 3.42e-21   NR HEX8298853.1 2838334 g15183 i0 77.4 1 62 14 100 0 186 1 427 488 HEX8298853.1 serine/threonine-protein kinase [Rubricoccaceae bacterium] diamond 186 95.9 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;