RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB9741", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJDB9741 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11488944 11488944 PRJDB9741_P_NODE_35690_length_163_cov_0.894737_g35373_i0 PRJDB9741 35690 163 0.894737 1.45842131 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 99.8 1.07e-22   NR MBI4011948.1 2053607 g35373 i0 100 0.993865030674847 54 0 99.4 0 2 163 597 650 MBI4011948.1 branched-chain amino acid ABC transporter ATP-binding protein/permease [Candidatus Rokuibacteriota bacterium] diamond 162 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27569614 27569614 PRJDB9741_P_NODE_9404_length_210_cov_2.875776_g9087_i0 PRJDB9741 9404 210 2.875776 6.0391296 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 47 8.02e-4   NR PYO20021.1 2053607 g9087 i0 60.5 1.95714285714286 38 15 54.3 0 114 1 208 245 PYO20021.1 MAG: hypothetical protein DMD88_13365 [Candidatus Rokuibacteriota bacterium] diamond 411 47 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28611648 28611648 PRJDB9741_P_NODE_25047_length_170_cov_1.644628_g24730_i0 PRJDB9741 25047 170 1.644628 2.7958676 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 47.8 2.14e-4   NR MDO8479189.1 2053607 g24730 i0 80.8 1.30588235294118 26 5 45.9 0 4 81 232 257 MDO8479189.1 methyltransferase domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 222 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;