RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJDB9741", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 6 ✖

tax_clade 1

  • Apusozoa · 6 ✖

bioproject 1

  • PRJDB9741 · 6 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10967 10967 PRJDB9741_P_NODE_30441_length_166_cov_0.871795_g30124_i0 PRJDB9741 30441 166 0.871795 1.4471797 Thecamonas trahens 529818 Root_unresolved Root_unresolved 154 3.699999999999999e-33   NTclustered gi|923133140|ref|XM_013904582.1| 461836 g30124 i0 88.889 20.7349397590361 126 12 75 2 1 125 152 276 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_03185), partial mRNA blastn 3442 154 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
1285158 1285158 PRJDB9741_P_NODE_18422_length_181_cov_1.159091_g18105_i0 PRJDB9741 18422 181 1.159091 2.09795471 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.001   NTclustered gi|923138782|ref|XM_013907402.1| 461836 g18105 i0 100 0.165745856353591 30 0 17 0 19 48 2733 2762 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_00585), mRNA blastn 30 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12764603 12764603 PRJDB9741_P_NODE_4671_length_297_cov_1.641129_g4355_i0 PRJDB9741 4671 297 1.641129 4.87415313 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 135 3.03e-36   NR XP_013760592.1 461836 g4355 i0 66.3 0.98989898989899 98 31 99 1 295 2 203 298 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 294 135 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
22962811 22962811 PRJDB9741_P_NODE_2679_length_441_cov_2.104592_g2365_i0 PRJDB9741 2679 441 2.104592 9.28125072 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 171 3.73e-49   NR XP_013760592.1 461836 g2365 i0 61.2 0.91156462585034 134 50 91.2 1 2 403 209 340 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 402 171 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27506705 27506705 PRJDB9741_P_NODE_26703_length_167_cov_5.771186_g26386_i0 PRJDB9741 26703 167 5.771186 9.63788062 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.2 3.62e-9   NR XP_013760592.1 461836 g26386 i0 77.8 0.646706586826347 36 8 64.7 0 59 166 43 78 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 108 61.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29584148 29584148 PRJDB9741_P_NODE_6510_length_246_cov_1.289340_g6193_i0 PRJDB9741 6510 246 1.28934 3.1717764 root 1 Root_unresolved Root_unresolved 112 2.02e-29   NR XP_013759960.1 461836 g6193 i0 66.7 3.74390243902439 81 25 96.3 1 2 238 17 97 XP_013759960.1 40S ribosomal protein S12 [Thecamonas trahens ATCC 50062] diamond 921 113 0.991150442477876 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;