RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJDB4941", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJDB4941 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14038739 14038739 PRJDB4941_P_NODE_8172_length_416_cov_1.869210_g7404_i0 PRJDB4941 8172 416 1.86921 7.7759136 Sclerotinia sclerotiorum virga-like virus 1 2822935 Viruses Viruses 556 6.96e-154   NTclustered gi|2029278226|gb|MT646383.1| 2822935 g7404 i0 91.198 8.93509615384615 409 36 98 0 8 416 1464 1056 MAG: Sclerotinia sclerotiorum virga-like virus 1, partial genome blastn 3717 556 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Sclerotinia sclerotiorum virga-like virus 1
27000662 27000662 PRJDB4941_P_NODE_2862_length_935_cov_15.383747_g2208_i0 PRJDB4941 2862 935 15.383747 143.83803445 Grapevine wood holobiome associated deltaflexivirus 2 3384488 Viruses Viruses 47.8 0.0416   NR XLE34831.1 3384488 g2208 i0 26.4 0.474866310160428 148 86 43.3 4 708 304 211 348 XLE34831.1 hypothetical protein [Grapevine wood holobiome associated deltaflexivirus 2] diamond 444 47.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Grapevine wood holobiome associated deltaflexivirus 2
28100322 28100322 PRJDB4941_P_NODE_35065_length_168_cov_0.873950_g34297_i0 PRJDB4941 35065 168 0.87395 1.468236 Viruses 10239 Viruses Viruses 109 3.67e-26   NR QUE49128.1 2822935 g34297 i0 94.5 1.96428571428571 55 3 98.2 0 166 2 276 330 QUE49128.1 MAG: replicase [Sclerotinia sclerotiorum virga-like virus 1] diamond 330 110 0.990909090909091 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Sclerotinia sclerotiorum virga-like virus 1
30537987 30537987 PRJDB4941_P_NODE_12433_length_311_cov_1.171756_g11665_i0 PRJDB4941 12433 311 1.171756 3.64416116 Olivavirus actinidiae 2024724 Viruses Viruses 63.9 2.79e-9   NR QOJ38398.1 2024724 g11665 i0 38.1 2.02572347266881 105 52 99.4 3 2 310 169 262 QOJ38398.1 polyprotein [Olivavirus actinidiae] diamond 630 63.9 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Olivavirus Olivavirus actinidiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;