RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJDB4941" and tax_phylum = "Candidatus Dormiibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJDB4941 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28100319 28100319 PRJDB4941_P_NODE_30905_length_178_cov_3.217054_g30137_i0 PRJDB4941 30905 178 3.217054 5.72635612 Bacteria 2 Bacteria Bacteria 74.3 3.59e-14   NR HYM76629.1 2052315 g30137 i0 61 8.15730337078652 59 18 91 1 163 2 57 115 HYM76629.1 alkaline phytoceramidase [Candidatus Dormiibacterota bacterium] diamond 1452 74.3 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29558679 29558679 PRJDB4941_P_NODE_18010_length_244_cov_1.066667_g17242_i0 PRJDB4941 18010 244 1.066667 2.60266748 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 73.6 1.1e-13   NR HXJ75426.1 2052315 g17242 i0 48 0.922131147540984 75 39 92.2 0 3 227 151 225 HXJ75426.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Dormiibacterota bacterium] diamond 225 73.6 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32530453 32530453 PRJDB4941_P_NODE_7299_length_451_cov_1.843284_g6531_i0 PRJDB4941 7299 451 1.843284 8.31321084 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 75.9 8.07e-13   NR HMJ80408.1 2052315 g6531 i0 53.3 0.598669623059867 90 36 59.9 2 2 271 336 419 HMJ80408.1 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [Candidatus Dormiibacterota bacterium] diamond 270 75.9 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32782101 32782101 PRJDB4941_P_NODE_10320_length_352_cov_2.188119_g9552_i0 PRJDB4941 10320 352 2.188119 7.70217888 Candidatus Dormibacterales bacterium 3127010 Bacteria Bacteria 43.9 0.0475   NR MFI5283994.1 3127010 g9552 i0 47.8 0.392045454545455 46 24 39.2 0 19 156 292 337 MFI5283994.1 tetratricopeptide repeat protein [Candidatus Dormibacterales bacterium] diamond 138 43.9 1 Bacteria   Bacillati Candidatus Dormiibacterota Candidatus Dormibacteria Candidatus Dormibacterales     Candidatus Dormibacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;