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contig_metadata

4 rows where bioproject = "PRJDB4941" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB4941 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19136080 19136080 PRJDB4941_P_NODE_40576_length_162_cov_1.353982_g39808_i0 PRJDB4941 40576 162 1.353982 2.19345084 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 94 6.4400000000000006e-21   NR KNE59422.1 578462 g39808 i0 78.8 1.92592592592593 52 11 96.3 0 161 6 41 92 KNE59422.1 hypothetical protein AMAG_03701 [Allomyces macrogynus ATCC 38327] diamond 312 94 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
29874641 29874641 PRJDB4941_P_NODE_31531_length_176_cov_2.220472_g30763_i0 PRJDB4941 31531 176 2.220472 3.90803072 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 103 7.769999999999999e-24   NR KNE67797.1 578462 g30763 i0 87.9 0.988636363636364 58 7 98.9 0 2 175 508 565 KNE67797.1 hypothetical protein AMAG_12519 [Allomyces macrogynus ATCC 38327] diamond 174 103 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
31612745 31612745 PRJDB4941_P_NODE_39196_length_164_cov_0.904348_g38428_i0 PRJDB4941 39196 164 0.904348 1.48313072 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 100 7.879999999999999e-23   NR KNE67797.1 578462 g38428 i0 86.8 0.969512195121951 53 7 97 0 163 5 395 447 KNE67797.1 hypothetical protein AMAG_12519 [Allomyces macrogynus ATCC 38327] diamond 159 100 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
32498781 32498781 PRJDB4941_P_NODE_19099_length_235_cov_1.774194_g18331_i0 PRJDB4941 19099 235 1.774194 4.1693559 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 62.8 2.75e-10   NR KNE61498.1 578462 g18331 i0 45.2 0.791489361702128 62 34 79.1 0 1 186 72 133 KNE61498.1 hypothetical protein, variant [Allomyces macrogynus ATCC 38327] diamond 186 62.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;