RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4941", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28959114 28959114 PRJDB4941_P_NODE_30988_length_178_cov_2.062016_g30220_i0 PRJDB4941 30988 178 2.062016 3.67038848 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 45.8 0.00129   NR ORX94711.1 1314790 g30220 i0 91.7 2.52808988764045 24 2 40.4 0 64 135 8 31 ORX94711.1 SART-1 protein [Basidiobolus meristosporus CBS 931.73] diamond 450 45.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
29016421 29016421 PRJDB4941_P_NODE_31868_length_175_cov_1.793651_g31100_i0 PRJDB4941 31868 175 1.793651 3.13888925 Fungi 4751 Fungi Fungi 120 1.6199999999999998e-32   NR KAJ1962646.1 4866 g31100 i0 100 190.165714285714 57 0 97.7 0 4 174 3 59 KAJ1962646.1 GTPase Cdc42 [Dipsacomyces acuminosporus] diamond 33279 121 0.991735537190083 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Dipsacomyces Dipsacomyces acuminosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;