RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4941", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26747200 26747200 PRJDB4941_P_NODE_14661_length_279_cov_1.130435_g13893_i0 PRJDB4941 14661 279 1.130435 3.15391365 Vampirovibrionales bacterium 2692181 Bacteria Bacteria 46.6 0.00235   NR MFM7389485.1 2692181 g13893 i0 48.9 0.505376344086022 47 24 50.5 0 9 149 234 280 MFM7389485.1 tetratricopeptide repeat protein [Vampirovibrionales bacterium] diamond 141 46.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales     Vampirovibrionales bacterium
29937840 29937840 PRJDB4941_P_NODE_36951_length_166_cov_0.888889_g36183_i0 PRJDB4941 36951 166 0.888889 1.47555574 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 90.9 1.18e-19   NR MBX9720368.1 2364082 g36183 i0 80 0.993975903614458 55 11 99.4 0 1 165 38 92 MBX9720368.1 Na+/H+ antiporter [Candidatus Obscuribacterales bacterium] diamond 165 90.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;