RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4941", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29022416 29022416 PRJDB4941_P_NODE_22788_length_212_cov_1.276074_g22020_i0 PRJDB4941 22788 212 1.276074 2.70527688 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 66.2 1.19e-10   NR MCC6487243.1 2030809 g22020 i0 53.6 3.77830188679245 56 26 79.2 0 45 212 20 75 MCC6487243.1 A/G-specific adenine glycosylase [Candidatus Hydrogenedentota bacterium] diamond 801 66.2 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31517952 31517952 PRJDB4941_P_NODE_37856_length_165_cov_0.896552_g37088_i0 PRJDB4941 37856 165 0.896552 1.4793108 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 61.6 1.52e-9   NR MFA6239961.1 3120109 g37088 i0 52.1 0.872727272727273 48 23 87.3 0 147 4 170 217 MFA6239961.1 hypothetical protein [Candidatus Hydrogenedentales bacterium] diamond 144 61.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;