RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJDB4941", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJDB4941 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27412035 27412035 PRJDB4941_P_NODE_36183_length_167_cov_0.881356_g35415_i0 PRJDB4941 36183 167 0.881356 1.47186452 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87.4 1.63e-18   NR HEY6020430.1 2053589 g35415 i0 71.7 0.952095808383233 53 15 95.2 0 1 159 187 239 HEY6020430.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 159 87.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27538150 27538150 PRJDB4941_P_NODE_26964_length_193_cov_1.368056_g26196_i0 PRJDB4941 26964 193 1.368056 2.64034808 Minisyncoccota bacterium 2053589 Bacteria Bacteria 63.5 4.07e-10   NR HRY50813.1 2053589 g26196 i0 50.9 1.78756476683938 57 27 87 1 192 25 63 119 HRY50813.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 345 63.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28643334 28643334 PRJDB4941_P_NODE_41007_length_162_cov_0.920354_g40239_i0 PRJDB4941 41007 162 0.920354 1.49097348 Minisyncoccota bacterium 2053589 Bacteria Bacteria 78.6 2.84e-15   NR MFA6608560.1 2053589 g40239 i0 71.7 2.94444444444444 53 15 98.1 0 3 161 504 556 MFA6608560.1 GspE/PulE family protein [Candidatus Paceibacterota bacterium] diamond 477 78.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32372206 32372206 PRJDB4941_P_NODE_40199_length_163_cov_0.912281_g39431_i0 PRJDB4941 40199 163 0.912281 1.48701803 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.9 1.43e-6   NR MFA6495458.1 2053589 g39431 i0 48 0.920245398773006 50 25 90.2 1 16 162 62 111 MFA6495458.1 LamG-like jellyroll fold domain-containing protein [Candidatus Paceibacterota bacterium] diamond 150 53.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;