RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB4941", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJDB4941 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30790796 30790796 PRJDB4941_P_NODE_6274_length_504_cov_2.936264_g5507_i0 PRJDB4941 6274 504 2.936264 14.79877056 Candidatus Rokubacteria bacterium GWC2_7 1802097 Bacteria Bacteria 204 2.93e-61   NR OGK88608.1 1802097 g5507 i0 69.3 4.13095238095238 140 43 83.3 0 422 3 3 142 OGK88608.1 MAG: aminotransferase class V [Candidatus Rokubacteria bacterium GWC2_70_16] diamond 2082 204 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium GWC2_70_16
31448705 31448705 PRJDB4941_P_NODE_5696_length_543_cov_3.228745_g4931_i0 PRJDB4941 5696 543 3.228745 17.53208535 Bacteria 2 Bacteria Bacteria 162 3.69e-43   NR MBI4589069.1 2053607 g4931 i0 53.1 7.30939226519337 162 76 89.5 0 58 543 106 267 MBI4589069.1 sulfatase [Candidatus Rokuibacteriota bacterium] diamond 3969 163 0.993865030674847 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32562151 32562151 PRJDB4941_P_NODE_21699_length_218_cov_1.633136_g20931_i0 PRJDB4941 21699 218 1.633136 3.56023648 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 50.8 3.74e-5   NR PYN25283.1 2053607 g20931 i0 64.9 0.509174311926605 37 13 50.9 0 107 217 28 64 PYN25283.1 MAG: hypothetical protein DMD99_08875 [Candidatus Rokuibacteriota bacterium] diamond 111 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;