RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4941", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30095591 30095591 PRJDB4941_P_NODE_38932_length_164_cov_0.904348_g38164_i0 PRJDB4941 38932 164 0.904348 1.48313072 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 41.6 0.00444   NR MCX6756191.1 2052152 g38164 i0 50 0.695121951219512 38 19 69.5 0 116 3 1 38 MCX6756191.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 114 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30948960 30948960 PRJDB4941_P_NODE_34334_length_169_cov_0.866667_g33566_i0 PRJDB4941 34334 169 0.866667 1.46466723 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 48.9 8.91e-5   NR MEI6811082.1 2052152 g33566 i0 85.7 0.497041420118343 28 4 49.7 0 3 86 493 520 MEI6811082.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 84 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;