RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4941", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Lindowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Lindowiibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10212912 10212912 PRJDB4941_P_NODE_13869_length_288_cov_2.368201_g13101_i0 PRJDB4941 13869 288 2.368201 6.82041888 Candidatus Lindowiibacteriota bacterium 2750076 Bacteria Bacteria 93.6 5.92e-20   NR MBL4889366.1 2750076 g13101 i0 53.3 0.958333333333333 92 43 95.8 0 11 286 4 95 MBL4889366.1 NHL repeat-containing protein [Candidatus Lindowbacteria bacterium] diamond 276 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Lindowiibacteriota         Candidatus Lindowiibacteriota bacterium
29653176 29653176 PRJDB4941_P_NODE_23990_length_206_cov_1.216561_g23222_i0 PRJDB4941 23990 206 1.216561 2.50611566 Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27 1817870 Bacteria Bacteria 78.2 7.53e-15   NR OGH61458.1 1817870 g23222 i0 59.7 2.89805825242718 67 27 97.6 0 205 5 175 241 OGH61458.1 MAG: hypothetical protein A3G34_05610 [Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27] diamond 597 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Lindowiibacteriota         Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;