RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJDB4941", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Eiseniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJDB4941 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27126892 27126892 PRJDB4941_P_NODE_29922_length_182_cov_1.375940_g29154_i0 PRJDB4941 29922 182 1.37594 2.5042108 Candidatus Eisenbacteria bacterium 2212470 Bacteria Bacteria 55.8 3.92e-7   NR TMQ58141.1 2212470 g29154 i0 63.2 0.626373626373626 38 14 62.6 0 180 67 76 113 TMQ58141.1 MAG: hypothetical protein E6K76_08695 [Candidatus Eiseniibacteriota bacterium] diamond 114 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31644167 31644167 PRJDB4941_P_NODE_11977_length_319_cov_1.918519_g11209_i0 PRJDB4941 11977 319 1.918519 6.12007561 Candidatus Eisenbacteria bacterium RBG_16_71_46 1817856 Bacteria Bacteria 71.2 5.16e-12   NR OGF05492.1 1817856 g11209 i0 54.5 0.987460815047022 55 25 51.7 0 310 146 251 305 OGF05492.1 MAG: ABC transporter [Candidatus Eisenbacteria bacterium RBG_16_71_46] diamond 315 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eisenbacteria bacterium RBG_16_71_46
31960629 31960629 PRJDB4941_P_NODE_12678_length_306_cov_3.424125_g11910_i0 PRJDB4941 12678 306 3.424125 10.4778225 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 59.7 8.83e-8   NR HEU4940008.1 2212470 g11910 i0 35.4 0.941176470588235 96 60 93.1 2 19 303 29 123 HEU4940008.1 kelch repeat-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 288 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;