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contig_metadata

34 rows where bioproject = "PRJDB4470" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 34 ✖

tax_clade 1

bioproject 1

  • PRJDB4470 · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
981483 981483 PRJDB4470_S_NODE_21_length_255_cov_2.876106_g20_i0 PRJDB4470 21 255 2.876106 7.3340703 Pyrococcus 2260 Archaea Archaea 466 6.98e-127   NTclustered gi|18980902|gb|AE009950.1| 186497 g20 i0 99.608 3 255 1 100 0 1 255 1527485 1527739 Pyrococcus furiosus DSM 3638, complete genome blastn 765 466 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
1283332 1283332 PRJDB4470_P_NODE_110942_length_165_cov_0.896552_g109787_i0 PRJDB4470 110942 165 0.896552 1.4793108 Halalkalicoccus salilacus 3117459 Archaea Archaea 152 1.3199999999999998e-32   NTclustered gi|2674869203|gb|CP144461.1| 3117459 g109787 i0 83.735 2.89090909090909 166 21 99 5 1 163 1178529 1178367 Halalkalicoccus salilacus strain FCH27 chromosome, complete genome blastn 477 152 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
2558903 2558903 PRJDB4470_P_NODE_102483_length_168_cov_0.873950_g101328_i0 PRJDB4470 102483 168 0.87395 1.468236 Halalkalicoccus salilacus 3117459 Archaea Archaea 196 6.16e-46   NTclustered gi|2674869206|gb|CP144464.1| 3117459 g101328 i0 88.095 2 168 17 100 2 1 168 28823 28987 Halalkalicoccus salilacus strain FCH27 plasmid unnamed3, complete sequence blastn 336 196 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
3531837 3531837 PRJDB4470_P_NODE_104683_length_167_cov_0.881356_g103528_i0 PRJDB4470 104683 167 0.881356 1.47186452 Halomarina 871740 Archaea Archaea 150 4.83e-32   NTclustered gi|2270305250|gb|CP100454.1| 2961599 g103528 i0 87.121 29.6347305389222 132 17 83 0 1 132 2795611 2795742 Halomarina pelagica strain BND7 chromosome, complete genome blastn 4949 150 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina pelagica
3532143 3532143 PRJDB4470_S_NODE_3_length_418_cov_3.516710_g2_i0 PRJDB4470 3 418 3.51671 14.6998478 Pyrococcus 2260 Archaea Archaea 773 0   NTclustered gi|18980902|gb|AE009950.1| 186497 g2 i0 100 3 418 0 100 0 1 418 1526962 1526545 Pyrococcus furiosus DSM 3638, complete genome blastn 1254 773 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
6084436 6084436 PRJDB4470_P_NODE_28365_length_435_cov_4.582902_g27225_i0 PRJDB4470 28365 435 4.582902 19.9356237 Methanolobus 2220 Archaea Archaea 54.7 0.012   NTclustered gi|2621717818|emb|OY776215.1| 218300 g27225 i0 96.875 2.13333333333333 32 1 7 0 378 409 1488584 1488553 MAG: uncultured Methanolobus sp. isolate 56865bd2-6141-42f0-955c-5236203a12ea genome assembly, chromosome: 1 blastn 928 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus uncultured Methanolobus sp.
8634586 8634586 PRJDB4470_S_NODE_7_length_383_cov_3.076271_g6_i0 PRJDB4470 7 383 3.076271 11.78211793 Pyrococcus 2260 Archaea Archaea 697 0   NTclustered gi|18980902|gb|AE009950.1| 186497 g6 i0 99.478 4.79895561357702 383 2 100 0 1 383 1526203 1526585 Pyrococcus furiosus DSM 3638, complete genome blastn 1838 697 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
10212183 10212183 PRJDB4470_P_NODE_26029_length_460_cov_2.102190_g24893_i0 PRJDB4470 26029 460 2.10219 9.670074 Natrinema pellirubrum 69525 Archaea Archaea 52.8 0.045   NTclustered gi|433304139|gb|CP003372.1| 797303 g24893 i0 100 0.0608695652173913 28 0 6 0 65 92 2724862 2724835 Natrinema pellirubrum DSM 15624, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema pellirubrum
14037097 14037097 PRJDB4470_P_NODE_105712_length_167_cov_0.864407_g104557_i0 PRJDB4470 105712 167 0.864407 1.44355969 Sulfolobaceae archaeon 2967306 Archaea Archaea 94 1.05e-21   NR MEM0173401.1 2967306 g104557 i0 80 0.988023952095808 55 11 98.8 0 167 3 184 238 MEM0173401.1 hypothetical protein [Sulfolobaceae archaeon] diamond 165 94 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon
15009379 15009379 PRJDB4470_S_NODE_12_length_290_cov_4.026820_g11_i0 PRJDB4470 12 290 4.02682 11.677778 Pyrococcus 2260 Archaea Archaea 536 6.079999999999999e-148   NTclustered gi|18980902|gb|AE009950.1| 186497 g11 i0 100 9.52068965517241 290 0 100 0 1 290 1526155 1525866 Pyrococcus furiosus DSM 3638, complete genome blastn 2761 536 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
16284153 16284153 PRJDB4470_S_NODE_13_length_282_cov_2.956522_g12_i0 PRJDB4470 13 282 2.956522 8.33739204 Pyrococcus 2260 Archaea Archaea 521 1.6499999999999996e-143   NTclustered gi|18980902|gb|AE009950.1| 186497 g12 i0 100 3 282 0 100 0 1 282 1527367 1527086 Pyrococcus furiosus DSM 3638, complete genome blastn 846 521 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
19134554 19134554 PRJDB4470_P_NODE_102316_length_168_cov_0.873950_g101161_i0 PRJDB4470 102316 168 0.87395 1.468236 Natronorubrum daqingense 588898 Archaea Archaea 226 7.859999999999997e-55   NTclustered gi|1134983310|gb|CP019329.1| 588898 g101161 i0 91.018 0.994047619047619 167 15 99 0 1 167 17259 17093 Natronorubrum daqingense strain JX313T plasmid unnamed2, complete sequence blastn 167 226 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum daqingense
19134565 19134565 PRJDB4470_P_NODE_104336_length_167_cov_0.881356_g103181_i0 PRJDB4470 104336 167 0.881356 1.47186452 Natronorubrum daqingense 588898 Archaea Archaea 268 1.28e-67   NTclustered gi|1134979927|gb|CP019327.1| 588898 g103181 i0 95.783 99.4311377245509 166 7 99 0 2 167 1189581 1189416 Natronorubrum daqingense strain JX313, complete sequence blastn 16605 268 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum daqingense
26810981 26810981 PRJDB4470_P_NODE_78821_length_201_cov_1.993421_g77666_i0 PRJDB4470 78821 201 1.993421 4.00677621 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 93.2 1.04e-20   NR HJR46673.1 2169593 g77666 i0 82.4 2.28358208955224 51 9 76.1 0 5 157 285 335 HJR46673.1 site-specific integrase [Nitrososphaeraceae archaeon] diamond 459 93.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27064038 27064038 PRJDB4470_P_NODE_100862_length_169_cov_0.866667_g99707_i0 PRJDB4470 100862 169 0.866667 1.46466723 Thermoprotei archaeon 2250277 Archaea Archaea 45.4 0.00158   NR RLE67006.1 2250277 g99707 i0 60.5 0.674556213017751 38 15 67.5 0 169 56 690 727 RLE67006.1 MAG: hypothetical protein DRJ38_00100 [Thermoprotei archaeon] diamond 114 45.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
27064052 27064052 PRJDB4470_P_NODE_45962_length_310_cov_1.383142_g44809_i0 PRJDB4470 45962 310 1.383142 4.2877402 Sulfolobaceae archaeon 2967306 Archaea Archaea 57 3.78e-7   NR MEM0173671.1 2967306 g44809 i0 38 2.7 100 41 76.5 4 73 309 1 100 MEM0173671.1 zonular occludens toxin domain-containing protein [Sulfolobaceae archaeon] diamond 837 57 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon
27632816 27632816 PRJDB4470_P_NODE_102624_length_168_cov_0.873950_g101469_i0 PRJDB4470 102624 168 0.87395 1.468236 Thermoproteota archaeon 2056631 Archaea Archaea 42.4 0.0185   NR MEM2886237.1 2056631 g101469 i0 35.8 0.946428571428571 53 33 94.6 1 2 160 137 188 MEM2886237.1 DUF6785 family protein [Thermoproteota archaeon] diamond 159 42.4 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
27885307 27885307 PRJDB4470_P_NODE_36545_length_367_cov_1.500000_g35393_i0 PRJDB4470 36545 367 1.5 5.505 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 120 1.36e-29   NR RLI56040.1 2053491 g35393 i0 54.2 3.84196185286104 118 51 96.5 2 354 1 270 384 RLI56040.1 MAG: saccharopine dehydrogenase [Candidatus Thorarchaeota archaeon] diamond 1410 120 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
28258140 28258140 PRJDB4470_P_NODE_107786_length_166_cov_0.888889_g106631_i0 PRJDB4470 107786 166 0.888889 1.47555574 Halobacteriales 2235 Archaea Archaea 102 2.08e-24   NR WP_340605028.1 175632 g106631 i0 81.8 8.94578313253012 55 10 99.4 0 166 2 89 143 WP_340605028.1 D-2-hydroxyacid dehydrogenase [Halalkalicoccus tibetensis] diamond 1485 102 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
28422317 28422317 PRJDB4470_P_NODE_96146_length_174_cov_1.648000_g94991_i0 PRJDB4470 96146 174 1.648 2.86752 Nitrososphaeria archaeon 2268198 Archaea Archaea 56.6 6.66e-8   NR MEM2741052.1 2268198 g94991 i0 53.5 0.741379310344828 43 20 74.1 0 7 135 133 175 MEM2741052.1 hypothetical protein [Nitrososphaeria archaeon] diamond 129 56.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon
28485284 28485284 PRJDB4470_P_NODE_114567_length_164_cov_0.904348_g113412_i0 PRJDB4470 114567 164 0.904348 1.48313072 Halalkalicoccus paucihalophilus 1008153 Archaea Archaea 50.8 1.43e-6   NR KYH23987.1 1008153 g113412 i0 48.9 0.859756097560976 47 23 86 1 12 152 16 61 KYH23987.1 hypothetical protein HAPAU_40660 [Halalkalicoccus paucihalophilus] diamond 141 50.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus paucihalophilus
28674771 28674771 PRJDB4470_P_NODE_101947_length_168_cov_1.638655_g100792_i0 PRJDB4470 101947 168 1.638655 2.7529404 archaeon 1906665 Archaea Archaea 62 2.07e-9   NR NCQ52134.1 1906665 g100792 i0 54.2 0.857142857142857 48 22 85.7 0 6 149 14 61 NCQ52134.1 AAA domain-containing protein [archaeon] diamond 144 62 1 Archaea               archaeon
29274450 29274450 PRJDB4470_P_NODE_64529_length_235_cov_3.897849_g63374_i0 PRJDB4470 64529 235 3.897849 9.15994515 archaeon 1906665 Archaea Archaea 78.2 1.08e-14   NR RYG70068.1 1906665 g63374 i0 54.8 0.931914893617021 73 30 90.6 2 213 1 203 274 RYG70068.1 MAG: hypothetical protein EON64_01180 [archaeon] diamond 219 78.2 1 Archaea               archaeon
29589999 29589999 PRJDB4470_P_NODE_87070_length_187_cov_1.456522_g85915_i0 PRJDB4470 87070 187 1.456522 2.72369614 Sulfolobaceae archaeon 2967306 Archaea Archaea 126 1.33e-34   NR MEM0173166.1 2967306 g85915 i0 98.4 0.978609625668449 61 1 97.9 0 185 3 39 99 MEM0173166.1 hypothetical protein [Sulfolobaceae archaeon] diamond 183 126 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon
29621425 29621425 PRJDB4470_P_NODE_34250_length_384_cov_1.808955_g33101_i0 PRJDB4470 34250 384 1.808955 6.9463872 Halogranum rubrum 553466 Archaea Archaea 44.3 0.0459   NR WP_009367134.1 553466 g33101 i0 41.9 0.484375 62 30 43.8 2 321 154 226 287 WP_009367134.1 cation:proton antiporter [Halogranum rubrum] diamond 186 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogranum Halogranum rubrum
30317365 30317365 PRJDB4470_P_NODE_43712_length_322_cov_1.622711_g42559_i0 PRJDB4470 43712 322 1.622711 5.22512942 archaeon 1906665 Archaea Archaea 144 1.66e-38   NR RYG70068.1 1906665 g42559 i0 60.4 0.987577639751553 106 42 98.8 0 3 320 275 380 RYG70068.1 MAG: hypothetical protein EON64_01180 [archaeon] diamond 318 144 1 Archaea               archaeon
30632629 30632629 PRJDB4470_P_NODE_98013_length_172_cov_1.252033_g96858_i0 PRJDB4470 98013 172 1.252033 2.15349676 Archaeoglobaceae archaeon 2511821 Archaea Archaea 50.8 5.26e-6   NR MCD6492420.1 2511821 g96858 i0 59.2 0.854651162790698 49 13 73.3 2 149 24 90 138 MCD6492420.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 147 50.8 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
30822367 30822367 PRJDB4470_P_NODE_94474_length_176_cov_3.803150_g93319_i0 PRJDB4470 94474 176 3.80315 6.693544 archaeon 1906665 Archaea Archaea 79.7 2.68e-17   NR RYH20684.1 1906665 g93319 i0 81.8 0.75 44 8 75 0 160 29 89 132 RYH20684.1 MAG: hypothetical protein EON65_22715 [archaeon] diamond 132 79.7 1 Archaea               archaeon
30980531 30980531 PRJDB4470_P_NODE_123354_length_162_cov_0.902655_g122199_i0 PRJDB4470 123354 162 0.902655 1.4623011 Methanomicrobia archaeon 2268195 Archaea Archaea 47.8 2.16e-4   NR NCA96145.1 2268195 g122199 i0 53.5 0.796296296296296 43 20 79.6 0 162 34 315 357 NCA96145.1 hypothetical protein [Methanomicrobia archaeon] diamond 129 47.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia       Methanomicrobia archaeon
31011894 31011894 PRJDB4470_P_NODE_112075_length_165_cov_0.879310_g110920_i0 PRJDB4470 112075 165 0.87931 1.4508615 Sulfolobaceae archaeon 2967306 Archaea Archaea 82.4 1.32e-16   NR MEM0174437.1 2967306 g110920 i0 79.6 0.981818181818182 54 11 98.2 0 164 3 434 487 MEM0174437.1 phage tail tape measure protein [Sulfolobaceae archaeon] diamond 162 82.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon
31454631 31454631 PRJDB4470_P_NODE_89796_length_183_cov_1.522388_g88641_i0 PRJDB4470 89796 183 1.522388 2.78597004 Sulfolobaceae archaeon 2967306 Archaea Archaea 61.2 1.78e-9   NR MEM0173399.1 2967306 g88641 i0 49.2 0.967213114754098 59 28 96.7 2 183 7 146 202 MEM0173399.1 hypothetical protein [Sulfolobaceae archaeon] diamond 177 61.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon
31486383 31486383 PRJDB4470_P_NODE_122876_length_162_cov_0.920354_g121721_i0 PRJDB4470 122876 162 0.920354 1.49097348 Natronococcus sp. A-GB7 3037649 Archaea Archaea 65.1 7.45e-11   NR WP_278305244.1 3037649 g121721 i0 58.5 0.981481481481482 53 22 98.1 0 1 159 63 115 WP_278305244.1 hypothetical protein [Natronococcus sp. A-GB7] diamond 159 65.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronococcus Natronococcus sp. A-GB7
31675811 31675811 PRJDB4470_P_NODE_110737_length_165_cov_0.896552_g109582_i0 PRJDB4470 110737 165 0.896552 1.4793108 Halalkalicoccus sp. 1973143 Archaea Archaea 87 2.92e-18   NR MEM4780006.1 1973143 g109582 i0 71.7 0.963636363636364 53 15 96.4 0 163 5 436 488 MEM4780006.1 alpha-amylase family glycosyl hydrolase [Halalkalicoccus sp.] diamond 159 87 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
32813682 32813682 PRJDB4470_P_NODE_102860_length_168_cov_0.873950_g101705_i0 PRJDB4470 102860 168 0.87395 1.468236 Halococcus sp. 29286 Archaea Archaea 87 2.58e-19   NR HET7323524.1 29286 g101705 i0 72.2 0.964285714285714 54 15 96.4 0 167 6 29 82 HET7323524.1 hypothetical protein [Halococcus sp.] diamond 162 87 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;