RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4470" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB4470 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29148729 29148729 PRJDB4470_P_NODE_81009_length_197_cov_1.405405_g79854_i0 PRJDB4470 81009 197 1.405405 2.76864785 Dysidea avara 196820 Porifera other_Eukaryota 50.8 4.74e-6   NR XP_065892624.1 196820 g79854 i0 71.9 0.974619289340102 32 9 48.7 0 195 100 37 68 XP_065892624.1 large ribosomal subunit protein P2-like [Dysidea avara] diamond 192 50.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
32277278 32277278 PRJDB4470_P_NODE_82299_length_195_cov_1.047945_g81144_i0 PRJDB4470 82299 195 1.047945 2.04349275 Halichondria panicea 6063 Porifera other_Eukaryota 53.9 2.23e-6   NR XP_064385052.1 6063 g81144 i0 40 0.923076923076923 60 36 92.3 0 182 3 966 1025 XP_064385052.1 uncharacterized protein LOC135333952 isoform X2 [Halichondria panicea] diamond 180 53.9 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;