RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4470", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJDB4470 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26810981 26810981 PRJDB4470_P_NODE_78821_length_201_cov_1.993421_g77666_i0 PRJDB4470 78821 201 1.993421 4.00677621 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 93.2 1.04e-20   NR HJR46673.1 2169593 g77666 i0 82.4 2.28358208955224 51 9 76.1 0 5 157 285 335 HJR46673.1 site-specific integrase [Nitrososphaeraceae archaeon] diamond 459 93.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
28422317 28422317 PRJDB4470_P_NODE_96146_length_174_cov_1.648000_g94991_i0 PRJDB4470 96146 174 1.648 2.86752 Nitrososphaeria archaeon 2268198 Archaea Archaea 56.6 6.66e-8   NR MEM2741052.1 2268198 g94991 i0 53.5 0.741379310344828 43 20 74.1 0 7 135 133 175 MEM2741052.1 hypothetical protein [Nitrososphaeria archaeon] diamond 129 56.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;