RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJDB4470" and tax_phylum = "Lenarviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJDB4470 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1284030 1284030 PRJDB4470_P_NODE_73242_length_213_cov_1.268293_g72087_i0 PRJDB4470 73242 213 1.268293 2.70146409 Grapevine wood holobiome associated narna-like virus 6 3398663 Viruses Viruses 135 1.81e-27   NTclustered gi|2905035787|gb|PV021973.1| 3398663 g72087 i0 79.31 1.97652582159624 203 35 94 6 1 201 1309 1506 Grapevine wood holobiome associated narna-like virus 6 isolate grp6 segment RNA3 HP1 and HP2 genes, complete cds blastn 421 135 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 6
1284164 1284164 PRJDB4470_P_NODE_87962_length_186_cov_1.116788_g86807_i0 PRJDB4470 87962 186 1.116788 2.07722568 Neofusicoccum parvum narnavirus 1 2587532 Viruses Viruses 204 4.15e-48   NTclustered gi|1682807473|gb|MK584833.1| 2587532 g86807 i0 86.631 3.01612903225806 187 21 99 4 1 185 2387 2571 MAG: Neofusicoccum parvum narnavirus 1 isolate CREA-VE-9AS3, complete sequence blastn 561 204 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Neofusicoccum parvum narnavirus 1
19135471 19135471 PRJDB4470_P_NODE_94756_length_176_cov_1.606299_g93601_i0 PRJDB4470 94756 176 1.606299 2.82708624 Botourmiaviridae sp. 2808997 Viruses Viruses 276 8.090000000000001e-70   NTclustered gi|2396039523|gb|ON812848.1| 2808997 g93601 i0 94.886 2 176 9 100 0 1 176 1796 1621 MAG: Botourmiaviridae sp. isolate TIGMIC_1, complete genome blastn 352 276 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
22961926 22961926 PRJDB4470_P_NODE_98139_length_172_cov_1.089431_g96984_i0 PRJDB4470 98139 172 1.089431 1.87382132 Sopafab virus 3131770 Viruses Viruses 185 1.3599999999999999e-42   NTclustered gi|2717323354|gb|PP174071.1| 3131770 g96984 i0 90.21 49.6162790697674 143 13 83 1 19 160 20 162 MAG: Sopafab virus isolate SP1C_k141_220867 genomic sequence blastn 8534 185 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopafab virus
24235427 24235427 PRJDB4470_P_NODE_50820_length_286_cov_1.755274_g49667_i0 PRJDB4470 50820 286 1.755274 5.02008364 Cryphonectria naterciae splipalmivirus 1 2841740 Viruses Viruses 110 2.53e-28   NR BCX55511.1 2841740 g49667 i0 60 0.996503496503496 95 37 99.7 1 2 286 59 152 BCX55511.1 hypothetical protein 1 [Cryphonectria naterciae splipalmivirus 1] diamond 285 110 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Divipalmivirus Divipalmivirus cryphonectriae
30063969 30063969 PRJDB4470_P_NODE_18752_length_560_cov_1.407045_g17666_i0 PRJDB4470 18752 560 1.407045 7.879452 Grapevine wood holobiome associated narna-like virus 18 3398654 Viruses Viruses 82.8 2.38e-16   NR XOD45390.1 3398654 g17666 i0 39 0.728571428571429 136 76 69.1 5 518 132 6 141 XOD45390.1 HP2 [Grapevine wood holobiome associated narna-like virus 18] diamond 408 82.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 18
30506460 30506460 PRJDB4470_P_NODE_113833_length_164_cov_1.808696_g112678_i0 PRJDB4470 113833 164 1.808696 2.96626144 Bremia lactucae associated narnavirus 1 2719802 Viruses Viruses 46.6 5.6e-4   NR QIP68008.1 2719802 g112678 i0 44.4 0.98780487804878 54 30 98.8 0 2 163 571 624 QIP68008.1 MAG: RNA-dependent RNA polymerase [Bremia lactucae associated narnavirus 1] diamond 162 46.6 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Bremia lactucae associated narnavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;