RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJDB4470", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJDB4470 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20410165 20410165 PRJDB4470_P_NODE_48497_length_297_cov_0.927419_g47344_i0 PRJDB4470 48497 297 0.927419 2.75443443 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.028   NTclustered gi|690706327|emb|LN262713.1| 99802 g47344 i0 100 0.282828282828283 28 0 9 0 132 159 90 117 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0060428 blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
30411964 30411964 PRJDB4470_P_NODE_77073_length_205_cov_1.000000_g75918_i0 PRJDB4470 77073 205 1 2.05 Trichobilharzia regenti 157069 Platyhelminthes Platyhelminthes 56.6 2.91e-7   NR CAH8840565.1 157069 g75918 i0 51.1 1.37560975609756 47 23 68.8 0 187 47 564 610 CAH8840565.1 unnamed protein product [Trichobilharzia regenti] diamond 282 56.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti
30689964 30689964 PRJDB4470_P_NODE_124993_length_162_cov_0.893805_g123838_i0 PRJDB4470 124993 162 0.893805 1.4479641 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 83.2 6.77e-17   NR VDM16309.1 6205 g123838 i0 77.4 15.7037037037037 53 12 98.1 0 161 3 890 942 VDM16309.1 unnamed protein product [Hydatigera taeniaeformis] diamond 2544 83.6 0.995215311004785 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
32498759 32498759 PRJDB4470_P_NODE_70959_length_218_cov_1.846154_g69804_i0 PRJDB4470 70959 218 1.846154 4.02461572 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 42.4 0.0141   NR CAL5131311.1 300641 g69804 i0 27.7 0.646788990825688 47 34 64.7 0 167 27 46 92 CAL5131311.1 unnamed protein product [Calicophoron daubneyi] diamond 141 42.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;