RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4470", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJDB4470 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7661409 7661409 PRJDB4470_P_NODE_115487_length_164_cov_0.886957_g114332_i0 PRJDB4470 115487 164 0.886957 1.45460948 Capsulimonadales bacterium 2971800 Bacteria Bacteria 88.6 1.54e-19   NR MDX1934564.1 2971800 g114332 i0 80.8 0.951219512195122 52 10 95.1 0 160 5 74 125 MDX1934564.1 isoprenyl transferase [Capsulimonadales bacterium] diamond 156 88.6 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
27506646 27506646 PRJDB4470_P_NODE_115343_length_164_cov_0.886957_g114188_i0 PRJDB4470 115343 164 0.886957 1.45460948 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.1 0.00197   NR MBC8137070.1 2033014 g114188 i0 95.5 0.402439024390244 22 1 40.2 0 97 162 443 464 MBC8137070.1 efflux RND transporter permease subunit [Armatimonadota bacterium] diamond 66 45.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;