RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4470", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJDB4470 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27790765 27790765 PRJDB4470_P_NODE_95324_length_175_cov_2.063492_g94169_i0 PRJDB4470 95324 175 2.063492 3.611111 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.0149   NR MBI4430541.1 2035772 g94169 i0 37.8 0.771428571428571 45 28 77.1 0 135 1 8 52 MBI4430541.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein [Candidatus Omnitrophota bacterium] diamond 135 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30790763 30790763 PRJDB4470_P_NODE_91234_length_181_cov_1.522727_g90079_i0 PRJDB4470 91234 181 1.522727 2.75613587 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 48.5 1.44e-4   NR MCX5712090.1 2035772 g90079 i0 45.6 0.94475138121547 57 29 91.2 1 167 3 27 83 MCX5712090.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 171 48.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;