contig_metadata
10 rows where bioproject = "PRJDB4470", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5112328 | 5112328 | PRJDB4470_P_NODE_94125_length_177_cov_1.492188_g92970_i0 | PRJDB4470 | 94125 | 177 | 1.492188 | 2.64117276 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 62 | 1.4e-9 | NR | HZM26761.1 | 2448054 | g92970 | i0 | 60.3 | 3.74576271186441 | 58 | 23 | 98.3 | 0 | 2 | 175 | 37 | 94 | HZM26761.1 SDR family oxidoreductase [Gemmatimonadales bacterium] | diamond | 663 | 62 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 6387379 | 6387379 | PRJDB4470_P_NODE_114106_length_164_cov_1.382609_g112951_i0 | PRJDB4470 | 114106 | 164 | 1.382609 | 2.26747876 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 207 | 2.76e-49 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g112951 | i0 | 90.506 | 63.4817073170732 | 158 | 13 | 96 | 2 | 8 | 164 | 8261566 | 8261410 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 10411 | 207 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 24234966 | 24234966 | PRJDB4470_P_NODE_110800_length_165_cov_0.896552_g109645_i0 | PRJDB4470 | 110800 | 165 | 0.896552 | 1.4793108 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 178 | 2.18e-40 | NTclustered | gi|2621703510|emb|OY762557.1| | 2910168 | g109645 | i0 | 86.585 | 105.569696969697 | 164 | 18 | 98 | 4 | 4 | 165 | 3610655 | 3610494 | MAG: Longimicrobiales bacterium isolate c10e2151-7d97-4465-9cf7-a78a4796a63d genome assembly, chromosome: 1 | blastn | 17419 | 178 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 27822403 | 27822403 | PRJDB4470_P_NODE_70584_length_219_cov_1.794118_g69429_i0 | PRJDB4470 | 70584 | 219 | 1.794118 | 3.92911842 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 120 | 3.7199999999999995e-30 | NR | MBL8988644.1 | 2026742 | g69429 | i0 | 78.9 | 3.87671232876712 | 71 | 15 | 97.3 | 0 | 214 | 2 | 330 | 400 | MBL8988644.1 aldehyde dehydrogenase family protein [Gemmatimonadota bacterium] | diamond | 849 | 120 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28895567 | 28895567 | PRJDB4470_P_NODE_100528_length_169_cov_1.275000_g99373_i0 | PRJDB4470 | 100528 | 169 | 1.275 | 2.15475 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 77.8 | 5.71e-15 | NR | PYO77019.1 | 2026742 | g99373 | i0 | 67.3 | 3.83431952662722 | 55 | 18 | 97.6 | 0 | 3 | 167 | 286 | 340 | PYO77019.1 MAG: amino acid permease [Gemmatimonadota bacterium] | diamond | 648 | 77.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 29900350 | 29900350 | PRJDB4470_P_NODE_105411_length_167_cov_0.864407_g104256_i0 | PRJDB4470 | 105411 | 167 | 0.864407 | 1.44355969 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 45.8 | 0.0011 | NR | HET7584929.1 | 2026741 | g104256 | i0 | 45.5 | 4.88622754491018 | 55 | 29 | 97 | 1 | 164 | 3 | 568 | 622 | HET7584929.1 tetratricopeptide repeat protein [Gemmatimonadaceae bacterium] | diamond | 816 | 45.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31391424 | 31391424 | PRJDB4470_P_NODE_65016_length_234_cov_1.654054_g63861_i0 | PRJDB4470 | 65016 | 234 | 1.654054 | 3.87048636 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 69.3 | 1.3e-11 | NR | HEX6535207.1 | 2026741 | g63861 | i0 | 62.7 | 1.26923076923077 | 51 | 18 | 65.4 | 1 | 4 | 156 | 197 | 246 | HEX6535207.1 OmpA family protein [Gemmatimonadaceae bacterium] | diamond | 297 | 69.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32055487 | 32055487 | PRJDB4470_P_NODE_102458_length_168_cov_0.873950_g101303_i0 | PRJDB4470 | 102458 | 168 | 0.87395 | 1.468236 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 42.4 | 0.0191 | NR | HET9982412.1 | 2910168 | g101303 | i0 | 41.8 | 0.982142857142857 | 55 | 29 | 98.2 | 1 | 4 | 168 | 69 | 120 | HET9982412.1 hypothetical protein [Longimicrobiales bacterium] | diamond | 165 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 32150558 | 32150558 | PRJDB4470_P_NODE_109778_length_166_cov_0.863248_g108623_i0 | PRJDB4470 | 109778 | 166 | 0.863248 | 1.43299168 | Gemmatimonadetes bacterium T265 | 2839016 | Bacteria | Bacteria | 71.6 | 1.13e-13 | NR | GJG88110.1 | 2839016 | g108623 | i0 | 84.1 | 0.795180722891566 | 44 | 7 | 79.5 | 0 | 2 | 133 | 144 | 187 | GJG88110.1 hypothetical protein tb265_32910 [Gemmatimonadetes bacterium T265] | diamond | 132 | 71.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium T265 | |||||
| 32182253 | 32182253 | PRJDB4470_P_NODE_86678_length_188_cov_0.892086_g85523_i0 | PRJDB4470 | 86678 | 188 | 0.892086 | 1.67712168 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 41.6 | 0.0402 | NR | HEY6222781.1 | 2448054 | g85523 | i0 | 44.9 | 0.781914893617021 | 49 | 22 | 78.2 | 1 | 8 | 154 | 105 | 148 | HEY6222781.1 transporter [Gemmatimonadales bacterium] | diamond | 147 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;