RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4470", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJDB4470 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28769322 28769322 PRJDB4470_P_NODE_113087_length_165_cov_0.870690_g111932_i0 PRJDB4470 113087 165 0.87069 1.4366385 Minisyncoccota bacterium 2053589 Bacteria Bacteria 98.2 3.91e-22   NR HRY49428.1 2053589 g111932 i0 92.7 3 55 4 100 0 1 165 311 365 HRY49428.1 multidrug efflux RND transporter permease subunit [Candidatus Paceibacterota bacterium] diamond 495 98.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32087239 32087239 PRJDB4470_P_NODE_70498_length_219_cov_2.323529_g69343_i0 PRJDB4470 70498 219 2.323529 5.08852851 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.4 1.83e-20   NR MDD4804026.1 2053589 g69343 i0 59.7 1.97260273972603 72 29 98.6 0 217 2 799 870 MDD4804026.1 anaerobic ribonucleoside-triphosphate reductase [Candidatus Paceibacterota bacterium] diamond 432 94.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;