RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB4470", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJDB4470 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14037568 14037568 PRJDB4470_P_NODE_45612_length_312_cov_1.083650_g44459_i0 PRJDB4470 45612 312 1.08365 3.380988 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 281 3.42e-71   NTclustered gi|2575803556|emb|OY729432.1| 2838779 g44459 i0 83.333 152.685897435897 318 40 100 11 1 312 2239197 2239507 MAG: Candidatus Binatia bacterium isolate b65fbbe8-1638-4b94-9072-1473f084fbf4 genome assembly, chromosome: 1 blastn 47638 281 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31707547 31707547 PRJDB4470_P_NODE_60297_length_249_cov_1.505000_g59142_i0 PRJDB4470 60297 249 1.505 3.74745 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 155 3.52e-45   NR HTR62709.1 2785449 g59142 i0 87.7 0.975903614457831 81 10 97.6 0 2 244 79 159 HTR62709.1 alpha/beta hydrolase [Candidatus Binataceae bacterium] diamond 243 155 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;