RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJDB3785" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJDB3785 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1282972 1282972 PRJDB3785_S_NODE_12802_length_214_cov_2.139394_g12649_i0 PRJDB3785 12802 214 2.139394 4.57830316 brine shrimp iflavirus 3 2900464 Viruses Viruses 379 7.609999999999999e-101   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g12649 i0 98.598 11 214 3 100 0 1 214 218 5 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 2354 379 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
2558532 2558532 PRJDB3785_S_NODE_103_length_2790_cov_3.331631_g92_i0 PRJDB3785 103 2790 3.331631 92.9525049 brine shrimp iflavirus 3 2900464 Viruses Viruses 5123 0   NTclustered gi|2209094750|gb|OL472447.1| 2900464 g92 i0 99.821 10.9960573476703 2789 5 99 0 1 2789 587 3375 MAG: Brine shrimp iflavirus 3 isolate BH/10-12 RNA-dependent RNA polymerase gene, complete cds blastn 30679 5123 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
2558674 2558674 PRJDB3785_S_NODE_22203_length_170_cov_1.082645_g22050_i0 PRJDB3785 22203 170 1.082645 1.8404965 Zebrafish picornavirus 1 2304617 Viruses Viruses 292 7.69e-75   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g22050 i0 97.647 3 170 4 100 0 1 170 7376 7545 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 510 292 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
7661245 7661245 PRJDB3785_S_NODE_6967_length_284_cov_2.591489_g6814_i0 PRJDB3785 6967 284 2.591489 7.35982876 brine shrimp iflavirus 3 2900464 Viruses Viruses 514 2.78e-141   NTclustered gi|2209094754|gb|OL472449.1| 2900464 g6814 i0 99.296 11 284 2 100 0 1 284 599 316 MAG: Brine shrimp iflavirus 3 isolate NM/94-18 RNA-dependent RNA polymerase gene, complete cds blastn 3124 514 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
14036761 14036761 PRJDB3785_S_NODE_12752_length_215_cov_1.036145_g12599_i0 PRJDB3785 12752 215 1.036145 2.22771175 brine shrimp partitivirus 1 2900392 Viruses Viruses 387 4.57e-103   NTclustered gi|2209094913|gb|OL472528.1| 2900392 g12599 i0 99.07 4 215 2 100 0 1 215 1741 1527 MAG: Brine shrimp partitivirus 1 isolate YC/91 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 860 387 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partitivirus 1
14036972 14036972 PRJDB3785_S_NODE_52_length_5859_cov_6.423580_g51_i0 PRJDB3785 52 5859 6.42358 376.3575522 brine shrimp iflavirus 3 2900464 Viruses Viruses 10781 0   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g51 i0 99.881 11.0078511691415 5859 7 100 0 1 5859 3353 9211 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 64495 10781 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
22960751 22960751 PRJDB3785_S_NODE_21779_length_171_cov_1.647541_g21626_i0 PRJDB3785 21779 171 1.647541 2.81729511 brine shrimp partitivirus 1 2900392 Viruses Viruses 316 4.6e-82   NTclustered gi|2209094913|gb|OL472528.1| 2900392 g21626 i0 100 4.00584795321637 171 0 100 0 1 171 1895 1725 MAG: Brine shrimp partitivirus 1 isolate YC/91 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 685 316 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partitivirus 1
27032338 27032338 PRJDB3785_S_NODE_27002_length_161_cov_1.339286_g26849_i0 PRJDB3785 27002 161 1.339286 2.15625046 Picornaviridae sp. 1530251 Viruses Viruses 107 1.49e-25   NR XDJ26655.1 1530251 g26849 i0 98.1 0.987577639751553 53 1 98.8 0 2 160 1679 1731 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 159 107 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
28327210 28327210 PRJDB3785_S_NODE_26946_length_161_cov_1.366071_g26793_i0 PRJDB3785 26946 161 1.366071 2.19937431 Picornaviridae sp. 1530251 Viruses Viruses 107 1.49e-25   NR XDJ26655.1 1530251 g26793 i0 83 0.987577639751553 53 9 98.8 0 3 161 1319 1371 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 159 107 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
31232919 31232919 PRJDB3785_S_NODE_24575_length_165_cov_0.879310_g24422_i0 PRJDB3785 24575 165 0.87931 1.4508615 Picornaviridae sp. 1530251 Viruses Viruses 81.6 2.47e-16   NR XDJ26655.1 1530251 g24422 i0 74.1 0.981818181818182 54 14 98.2 0 164 3 1763 1816 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 162 81.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;