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contig_metadata

19 rows where bioproject = "PRJDB3785" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 19 ✖

tax_kingdom 1

bioproject 1

  • PRJDB3785 · 19 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10211571 10211571 PRJDB3785_S_NODE_11949_length_221_cov_1.453488_g11796_i0 PRJDB3785 11949 221 1.453488 3.21220848 Pseudomonadati 3379134 Bacteria Bacteria 128 5.96e-33   NR MBW1808557.1 2026735 g11796 i0 82.2 20.8099547511312 73 13 99.1 0 1 219 18 90 MBW1808557.1 adenosylhomocysteinase [Deltaproteobacteria bacterium] diamond 4599 129 0.992248062015504 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26620883 26620883 PRJDB3785_S_NODE_7701_length_270_cov_2.307692_g7548_i0 PRJDB3785 7701 270 2.307692 6.2307684 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 59.3 5.33e-8   NR MBT6434336.1 2026735 g7548 i0 44.6 0.722222222222222 65 27 62.2 2 179 12 32 96 MBT6434336.1 lipocalin family protein [Deltaproteobacteria bacterium] diamond 195 59.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27089856 27089856 PRJDB3785_S_NODE_1442_length_670_cov_2.668277_g1316_i0 PRJDB3785 1442 670 2.668277 17.8774559 Pseudomonadati 3379134 Bacteria Bacteria 208 2.01e-64   NR MDO8426395.1 2026735 g1316 i0 53.3 8.93731343283582 197 91 87.8 1 7 594 1 197 MDO8426395.1 NAD(P)H:quinone oxidoreductase [Deltaproteobacteria bacterium] diamond 5988 209 0.995215311004785 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27380318 27380318 PRJDB3785_S_NODE_19923_length_178_cov_1.186047_g19770_i0 PRJDB3785 19923 178 1.186047 2.11116366 Myxococcales bacterium 2026763 Bacteria Bacteria 41.2 0.039   NR MCL4755588.1 2026763 g19770 i0 43.8 0.808988764044944 48 18 72.5 2 2 130 88 131 MCL4755588.1 hypothetical protein [Myxococcales bacterium] diamond 144 41.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27437634 27437634 PRJDB3785_S_NODE_26683_length_162_cov_0.893805_g26530_i0 PRJDB3785 26683 162 0.893805 1.4479641 Pseudomonadati 3379134 Bacteria Bacteria 51.2 3.93e-6   NR HSD87571.1 2212474 g26530 i0 46.3 3 54 29 100 0 162 1 57 110 HSD87571.1 EF-hand domain-containing protein [Kofleriaceae bacterium] diamond 486 51.2 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
27885287 27885287 PRJDB3785_S_NODE_24725_length_165_cov_0.862069_g24572_i0 PRJDB3785 24725 165 0.862069 1.42241385 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 41.6 0.035   NR HOO45880.1 2026735 g24572 i0 32.7 1 55 35 96.4 1 165 7 1167 1221 HOO45880.1 DUF6531 domain-containing protein [Deltaproteobacteria bacterium] diamond 165 41.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28706353 28706353 PRJDB3785_S_NODE_22607_length_168_cov_1.924370_g22454_i0 PRJDB3785 22607 168 1.92437 3.2329416 Polyangia bacterium 3058050 Bacteria Bacteria 47 4.31e-4   NR HEY3354648.1 3058050 g22454 i0 40.7 1.76785714285714 54 32 96.4 0 6 167 212 265 HEY3354648.1 kelch repeat-containing protein [Polyangia bacterium] diamond 297 47 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
28769313 28769313 PRJDB3785_S_NODE_7287_length_278_cov_2.048035_g7134_i0 PRJDB3785 7287 278 2.048035 5.6935373 Myxococcota bacterium 2818507 Bacteria Bacteria 85.1 9.59e-18   NR MEM9066982.1 2818507 g7134 i0 46.8 0.852517985611511 79 42 85.3 0 37 273 38 116 MEM9066982.1 transglutaminase-like domain-containing protein [Myxococcota bacterium] diamond 237 85.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28800793 28800793 PRJDB3785_S_NODE_6028_length_307_cov_1.511628_g5875_i0 PRJDB3785 6028 307 1.511628 4.64069796 Myxococcota bacterium 2818507 Bacteria Bacteria 85.5 7.15e-17   NR MCK6510237.1 2818507 g5875 i0 44.6 1.97394136807818 101 55 98.7 1 306 4 395 494 MCK6510237.1 leucyl aminopeptidase [Myxococcota bacterium] diamond 606 85.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
29463596 29463596 PRJDB3785_S_NODE_13010_length_213_cov_1.115854_g12857_i0 PRJDB3785 13010 213 1.115854 2.37676902 Kofleriaceae bacterium 2212474 Bacteria Bacteria 96.3 2.36e-21   NR MBP9205654.1 2212474 g12857 i0 60.9 0.971830985915493 69 27 97.2 0 2 208 179 247 MBP9205654.1 hypothetical protein [Kofleriaceae bacterium] diamond 207 96.3 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29747899 29747899 PRJDB3785_S_NODE_25371_length_164_cov_0.878261_g25218_i0 PRJDB3785 25371 164 0.878261 1.44034804 Kofleriaceae bacterium 2212474 Bacteria Bacteria 41.6 0.0327   NR HTJ45526.1 2212474 g25218 i0 45.5 0.804878048780488 44 23 80.5 1 136 5 145 187 HTJ45526.1 hypothetical protein [Kofleriaceae bacterium] diamond 132 41.6 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29874578 29874578 PRJDB3785_S_NODE_27251_length_161_cov_0.910714_g27098_i0 PRJDB3785 27251 161 0.910714 1.46624954 Kofleriaceae bacterium 2212474 Bacteria Bacteria 49.3 5.14e-5   NR HSS02155.1 2212474 g27098 i0 50 0.745341614906832 40 20 74.5 0 132 13 89 128 HSS02155.1 lysyl oxidase family protein [Kofleriaceae bacterium] diamond 120 49.3 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
30317346 30317346 PRJDB3785_S_NODE_7052_length_283_cov_1.089744_g6899_i0 PRJDB3785 7052 283 1.089744 3.08397552 Polyangiales bacterium 3034171 Bacteria Bacteria 75.9 1.38e-13   NR MFO0694287.1 3034171 g6899 i0 60 1.50530035335689 50 19 51.9 1 14 160 51 100 MFO0694287.1 thrombospondin type 3 repeat-containing protein [Polyangiales bacterium] diamond 426 75.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
30790714 30790714 PRJDB3785_S_NODE_21554_length_172_cov_1.243902_g21401_i0 PRJDB3785 21554 172 1.243902 2.13951144 Polyangiales bacterium 3034171 Bacteria Bacteria 54.7 8.4e-7   NR MEO7092848.1 3034171 g21401 i0 46.4 3.90697674418605 56 30 97.7 0 170 3 367 422 MEO7092848.1 hypothetical protein [Polyangiales bacterium] diamond 672 54.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
31486363 31486363 PRJDB3785_S_NODE_25396_length_164_cov_0.860870_g25243_i0 PRJDB3785 25396 164 0.86087 1.4118268 Myxococcota bacterium 2818507 Bacteria Bacteria 50.8 1.73e-5   NR MEM6959678.1 2818507 g25243 i0 45.1 1.86585365853659 51 27 93.3 1 162 10 131 180 MEM6959678.1 AMP-binding protein [Myxococcota bacterium] diamond 306 50.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31707526 31707526 PRJDB3785_S_NODE_7097_length_282_cov_1.313305_g6944_i0 PRJDB3785 7097 282 1.313305 3.7035201 Myxococcales bacterium 2026763 Bacteria Bacteria 77.4 5.09e-15   NR MCA9634375.1 2026763 g6944 i0 63 2.23404255319149 54 20 57.4 0 121 282 75 128 MCA9634375.1 hypothetical protein [Myxococcales bacterium] diamond 630 77.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32372138 32372138 PRJDB3785_S_NODE_27139_length_161_cov_0.910714_g26986_i0 PRJDB3785 27139 161 0.910714 1.46624954 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 68.2 1.3e-11   NR MBS1256511.1 2026735 g26986 i0 57.7 4.84472049689441 52 22 96.9 0 156 1 288 339 MBS1256511.1 Dihydrolipoyl dehydrogenase [Deltaproteobacteria bacterium] diamond 780 68.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32624674 32624674 PRJDB3785_S_NODE_25620_length_163_cov_1.342105_g25467_i0 PRJDB3785 25620 163 1.342105 2.18763115 Polyangiales bacterium 3034171 Bacteria Bacteria 41.2 0.0455   NR MFO0694193.1 3034171 g25467 i0 76.9 0.478527607361963 26 6 47.9 0 2 79 654 679 MFO0694193.1 DUF4215 domain-containing protein [Polyangiales bacterium] diamond 78 41.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
32902162 32902162 PRJDB3785_S_NODE_24560_length_165_cov_0.879310_g24407_i0 PRJDB3785 24560 165 0.87931 1.4508615 Pseudomonadati 3379134 Bacteria Bacteria 57 7.92e-8   NR MFT3842621.1 2484252 g24407 i0 58.1 1.6 43 18 78.2 0 163 35 142 184 MFT3842621.1 hypothetical protein [Myxococcaceae bacterium] diamond 264 57 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;