RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJDB3785" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB3785 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16585580 16585580 PRJDB3785_S_NODE_15534_length_198_cov_0.953020_g15381_i0 PRJDB3785 15534 198 0.95302 1.8869796 Blastocladiella emersonii 4808 Fungi Fungi 126 9.97e-25   NTclustered gi|111054102|gb|DQ787196.1| 4808 g15381 i0 78.607 6.3989898989899 201 35 99 5 2 198 2932 3128 Blastocladiella emersonii heat shock protein 90 kDa (hsp90) gene, complete cds blastn 1267 126 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
19134267 19134267 PRJDB3785_S_NODE_14956_length_201_cov_1.006579_g14803_i0 PRJDB3785 14956 201 1.006579 2.02322379 Blastocladiomycota 451459 Fungi Fungi 114 1.58e-28   NR KAJ3374942.1 64504 g14803 i0 87.3 20.0746268656716 63 8 94 0 3 191 280 342 KAJ3374942.1 hypothetical protein GGF31_005664 [Allomyces arbusculus] diamond 4035 115 0.991304347826087 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
20409467 20409467 PRJDB3785_S_NODE_24997_length_164_cov_1.295652_g24844_i0 PRJDB3785 24997 164 1.295652 2.12486928 Blastocladiella 4807 Fungi Fungi 92.8 2.88e-20   NR BAL15329.1 4808 g24844 i0 83.3 4.9390243902439 54 9 98.8 0 163 2 131 184 BAL15329.1 translation elongation factor 2, partial [Blastocladiella emersonii] diamond 810 92.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
24234642 24234642 PRJDB3785_S_NODE_18120_length_185_cov_1.500000_g17967_i0 PRJDB3785 18120 185 1.5 2.775 Paraphysoderma sedebokerense 1500003 Fungi Fungi 118 1.31e-30   NR KAI9140511.1 1500003 g17967 i0 88.3 1.94594594594595 60 7 97.3 0 2 181 196 255 KAI9140511.1 WD40-repeat-containing domain protein [Paraphysoderma sedebokerense] diamond 360 118 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
26874557 26874557 PRJDB3785_S_NODE_27161_length_161_cov_0.910714_g27008_i0 PRJDB3785 27161 161 0.910714 1.46624954 Paraphysoderma sedebokerense 1500003 Fungi Fungi 70.5 2e-12   NR KAI9136764.1 1500003 g27008 i0 58.2 8.19875776397516 55 20 96.9 1 6 161 804 858 KAI9136764.1 DNA photolyase, FAD-binding/Cryptochrome [Paraphysoderma sedebokerense] diamond 1320 70.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
27885294 27885294 PRJDB3785_S_NODE_3785_length_394_cov_1.350725_g3632_i0 PRJDB3785 3785 394 1.350725 5.3218565 Paraphysoderma sedebokerense 1500003 Fungi Fungi 93.6 2.03e-19   NR KAI9146346.1 1500003 g3632 i0 41.7 0.913705583756345 120 67 90.6 2 38 394 152 269 KAI9146346.1 hypothetical protein BKA69DRAFT_1120815 [Paraphysoderma sedebokerense] diamond 360 93.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29874573 29874573 PRJDB3785_S_NODE_23711_length_166_cov_1.290598_g23558_i0 PRJDB3785 23711 166 1.290598 2.14239268 Paraphysoderma sedebokerense 1500003 Fungi Fungi 109 1.19e-28   NR KAI9139359.1 1500003 g23558 i0 90.9 1.98795180722892 55 5 99.4 0 165 1 10 64 KAI9139359.1 cyclophilin-like domain-containing protein [Paraphysoderma sedebokerense] diamond 330 109 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31069400 31069400 PRJDB3785_S_NODE_25735_length_163_cov_0.894737_g25582_i0 PRJDB3785 25735 163 0.894737 1.45842131 Opisthokonta 33154 Fungi Fungi 66.6 4.74e-11   NR KAJ3374955.1 64504 g25582 i0 64.8 10.9141104294479 54 19 99.4 0 2 163 541 594 KAJ3374955.1 hypothetical protein GGF31_005677 [Allomyces arbusculus] diamond 1779 66.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
31701653 31701653 PRJDB3785_S_NODE_4057_length_379_cov_7.754545_g3904_i0 PRJDB3785 4057 379 7.754545 29.38972555 Fungi 4751 Fungi Fungi 121 8.440000000000001e-33   NR KAI9221418.1 64508 g3904 i0 59.8 4.60686015831135 97 39 76.8 0 350 60 14 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 1746 122 0.991803278688525 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;