RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB3785" and tax_kingdom = "Thermoproteati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJDB3785 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22960706 22960706 PRJDB3785_S_NODE_17039_length_190_cov_1.730496_g16886_i0 PRJDB3785 17039 190 1.730496 3.2879424 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.016   NTclustered gi|323706731|gb|CP002529.1| 985053 g16886 i0 100 0.147368421052632 28 0 15 0 93 120 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
28422268 28422268 PRJDB3785_S_NODE_25006_length_164_cov_1.260870_g24853_i0 PRJDB3785 25006 164 1.26087 2.0678268 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 68.2 1.36e-11   NR HYA84078.1 3045160 g24853 i0 62.5 4.31707317073171 48 18 87.8 0 19 162 4 51 HYA84078.1 ribosome biogenesis/translation initiation ATPase RLI [Candidatus Bathyarchaeia archaeon] diamond 708 68.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
28548580 28548580 PRJDB3785_S_NODE_20927_length_174_cov_1.632000_g20774_i0 PRJDB3785 20927 174 1.632 2.83968 Nitrososphaerota archaeon 2026795 Archaea Archaea 51.6 1.07e-5   NR MDE1816823.1 2026795 g20774 i0 53.5 7.06896551724138 43 20 74.1 0 17 145 455 497 MDE1816823.1 reverse transcriptase family protein [Nitrososphaerota archaeon] diamond 1230 51.6 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;