RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJDB3785" and tax_kingdom = "Bamfordvirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJDB3785 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8634304 8634304 PRJDB3785_S_NODE_9547_length_245_cov_0.974490_g9394_i0 PRJDB3785 9547 245 0.97449 2.3875005 root 1 Root_unresolved Root_unresolved 69.4 2.2e-7   NTclustered gi|939177347|ref|NC_028094.1| 455364 g9394 i0 100 1.64489795918367 37 0 15 0 76 112 351151 351115 Chrysochromulina ericina virus isolate CeV-01B, complete genome blastn 403 69.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Chrysochromulina ericina virus
23933609 23933609 PRJDB3785_S_NODE_13879_length_207_cov_1.291139_g13726_i0 PRJDB3785 13879 207 1.291139 2.67265773 root 1 Root_unresolved Root_unresolved 357 3.43e-94   NTclustered gi|2620236085|gb|OR777220.1| 10515 g13726 i0 98.522 97.2705314009662 203 1 98 2 1 202 15031 14830 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 20135 357 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
27253584 27253584 PRJDB3785_S_NODE_22423_length_169_cov_1.275000_g22270_i0 PRJDB3785 22423 169 1.275 2.15475 Terrestrivirus sp. 2487775 Viruses Viruses 82 2.24e-17   NR AYV75266.1 2487775 g22270 i0 65.5 1.95266272189349 55 19 97.6 0 3 167 7 61 AYV75266.1 MAG: putative elongation factor 1-gamma-A-like [Terrestrivirus sp.] diamond 330 82 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
29874553 29874553 PRJDB3785_S_NODE_11411_length_225_cov_2.312500_g11258_i0 PRJDB3785 11411 225 2.3125 5.203125 Terrestrivirus sp. 2487775 Viruses Viruses 48.5 5.36e-5   NR AYV76392.1 2487775 g11258 i0 56.5 0.613333333333333 46 19 61.3 1 8 145 1 45 AYV76392.1 MAG: hypothetical protein Terrestrivirus6_18 [Terrestrivirus sp.] diamond 138 48.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;