RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJDB3785", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 21 ✖

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJDB3785 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4809097 4809097 PRJDB3785_S_NODE_17984_length_186_cov_1.116788_g17831_i0 PRJDB3785 17984 186 1.116788 2.07722568 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 135 1.53e-27   NTclustered gi|505337|gb|L34027.1|PFAHSP86A 5833 g17831 i0 82.278 19.6720430107527 158 26 84 2 28 184 4595 4439 Plasmodium falciparum (clone Dd2) heat shock protein 86 gene, complete cds blastn 3659 135 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
6387003 6387003 PRJDB3785_S_NODE_13106_length_212_cov_1.564417_g12953_i0 PRJDB3785 13106 212 1.564417 3.31656404 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 167 6.379999999999999e-37   NTclustered gi|1027960071|ref|XM_735127.2| 31271 g12953 i0 85.897 57.4198113207547 156 22 74 0 35 190 1131 976 Plasmodium chabaudi chabaudi actin I, putative (PCHAS_1461600), partial mRNA blastn 12173 167 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
6387019 6387019 PRJDB3785_S_NODE_14366_length_204_cov_1.638710_g14213_i0 PRJDB3785 14366 204 1.6387100000000001 3.3429684 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 113 8.050000000000001e-21   NTclustered gi|1620141318|ref|XM_028676575.1| 85471 g14213 i0 86.408 21.2794117647059 103 14 50 0 101 203 40 142 Plasmodium relictum GTP-binding nuclear protein RAN/TC4, putative (RAN), partial mRNA blastn 4341 113 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
10211794 10211794 PRJDB3785_S_NODE_5329_length_328_cov_1.261649_g5176_i0 PRJDB3785 5329 328 1.261649 4.13820872 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.031   NTclustered gi|124806941|ref|XM_001350835.1| 36329 g5176 i0 100 0.0853658536585366 28 0 9 0 166 193 1770 1743 Plasmodium falciparum 3D7 conserved Plasmodium protein, unknown function (PF3D7_1248700), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
17860584 17860584 PRJDB3785_S_NODE_15615_length_197_cov_1.587838_g15462_i0 PRJDB3785 15615 197 1.587838 3.12804086 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.11e-15   NR KAF8817721.1 476202 g15462 i0 76 10.751269035533 50 11 76.1 1 150 1 17 65 KAF8817721.1 putative proteasome subunit alpha2, protease of the acylase family and NTN hydrolase fold [Cardiosporidium cionae] diamond 2118 78.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
24234548 24234548 PRJDB3785_S_NODE_10840_length_230_cov_1.685083_g10687_i0 PRJDB3785 10840 230 1.685083 3.8756909 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 118 1.22e-29   NR XP_067070022.1 117008 g10687 i0 85.9 4.17391304347826 64 9 83.5 0 38 229 1 64 XP_067070022.1 60s ribosomal protein L3 [Cryptosporidium andersoni] diamond 960 119 0.991596638655462 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
26810945 26810945 PRJDB3785_S_NODE_26641_length_162_cov_0.902655_g26488_i0 PRJDB3785 26641 162 0.902655 1.4623011 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 60.1 9.25e-9   NR KAF8817917.1 476202 g26488 i0 76.3 0.703703703703704 38 9 70.4 0 115 2 130 167 KAF8817917.1 sarco/endoplasmic reticulum Ca2+-ATPase, partial [Cardiosporidium cionae] diamond 114 60.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
27247803 27247803 PRJDB3785_S_NODE_17943_length_186_cov_1.240876_g17790_i0 PRJDB3785 17943 186 1.240876 2.30802936 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 47 5.86e-4   NR KEG00995.1 54757 g17790 i0 42.9 6.41935483870968 56 32 90.3 0 183 16 5682 5737 KEG00995.1 hypothetical protein YYE_04028 [Plasmodium vinckei vinckei] diamond 1194 47 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
27974146 27974146 PRJDB3785_S_NODE_16485_length_193_cov_1.395833_g16332_i0 PRJDB3785 16485 193 1.395833 2.69395769 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00152   NR AAK07769.1 5865 g16332 i0 43.6 4.72538860103627 55 30 85.5 1 165 1 116 169 AAK07769.1 putative N-methyl-aspartate receptor [Babesia bovis] diamond 912 45.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
28043198 28043198 PRJDB3785_S_NODE_1845_length_589_cov_10.568519_g1707_i0 PRJDB3785 1845 589 10.568519 62.24857691 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 207 3.2200000000000005e-64   NR OEH76901.1 88456 g1707 i0 60.7 3.65704584040747 183 72 93.2 0 5 553 29 211 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 2154 207 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
28106214 28106214 PRJDB3785_S_NODE_26365_length_162_cov_1.132743_g26212_i0 PRJDB3785 26365 162 1.132743 1.83504366 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 83.2 7.18e-19   NR CAL7860658.1 1344799 g26212 i0 66.7 12.9259259259259 54 18 100 0 162 1 57 110 CAL7860658.1 unnamed protein product [Sarcocystis calchasi] diamond 2094 83.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
28289719 28289719 PRJDB3785_S_NODE_3486_length_412_cov_1.322314_g3333_i0 PRJDB3785 3486 412 1.322314 5.44793368 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 138 2.8499999999999995e-35   NR XP_012337879.1 5857 g3333 i0 51.4 4.07766990291262 142 60 97.6 3 405 4 114 254 XP_012337879.1 asparagine-tRNA ligase [Plasmodium fragile] diamond 1680 139 0.992805755395683 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
28390469 28390469 PRJDB3785_S_NODE_15786_length_196_cov_1.734694_g15633_i0 PRJDB3785 15786 196 1.734694 3.40000024 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 103 3.81e-24   NR VWU50564.1 2600580 g15633 i0 76.9 2.98469387755102 65 15 99.5 0 195 1 274 338 VWU50564.1 S-adenosylmethionine synthetase, putative [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 585 103 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles
28479385 28479385 PRJDB3785_S_NODE_23786_length_166_cov_0.914530_g23633_i0 PRJDB3785 23786 166 0.91453 1.5181198 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 76.3 2.03e-14   NR XP_067717277.1 5871 g23633 i0 69.2 16.5542168674699 52 16 94 0 157 2 605 656 XP_067717277.1 26S proteasome regulatory subunit [Babesia caballi] diamond 2748 77 0.990909090909091 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
28548586 28548586 PRJDB3785_S_NODE_5307_length_328_cov_8.397849_g5154_i0 PRJDB3785 5307 328 8.397849 27.54494472 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 144 4.78e-41   NR XP_067804708.1 323732 g5154 i0 69.4 9.89634146341463 98 30 89.6 0 315 22 1 98 XP_067804708.1 bifunctional Ribosomal protein S8e/Ribosomal protein S8e [Babesia duncani] diamond 3246 144 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
29116866 29116866 PRJDB3785_S_NODE_24049_length_166_cov_0.871795_g23896_i0 PRJDB3785 24049 166 0.871795 1.4471797 Babesia bovis T2Bo 484906 SAR_Eukaryotes SAR_Eukaryotes 59.3 8.92e-9   NR XP_001609795.1 484906 g23896 i0 50.9 2.98192771084337 55 27 99.4 0 165 1 64 118 XP_001609795.1 Proteasome subunit beta type-1 family protein [Babesia bovis T2Bo] diamond 495 59.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
29148704 29148704 PRJDB3785_S_NODE_7629_length_272_cov_1.130045_g7476_i0 PRJDB3785 7629 272 1.130045 3.0737224 Theileria parva strain Muguga 333668 SAR_Eukaryotes SAR_Eukaryotes 94.7 1.51e-20   NR XP_764530.1 333668 g7476 i0 64.6 1.46691176470588 65 23 71.7 0 2 196 332 396 XP_764530.1 methionine adenosyltransferase [Theileria parva strain Muguga] diamond 399 94.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria parva
29369340 29369340 PRJDB3785_S_NODE_25209_length_164_cov_0.886957_g25056_i0 PRJDB3785 25209 164 0.886957 1.45460948 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 70.9 6.39e-13   NR OEH74043.1 88456 g25056 i0 59.6 8.61585365853658 52 21 95.1 0 161 6 158 209 OEH74043.1 ribosomal protein rpp0 [Cyclospora cayetanensis] diamond 1413 70.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31486371 31486371 PRJDB3785_S_NODE_6716_length_290_cov_1.692946_g6563_i0 PRJDB3785 6716 290 1.692946 4.9095434 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0368   NR XP_003880431.1 572307 g6563 i0 28.3 1.02413793103448 99 65 96.2 1 283 5 1155 1253 XP_003880431.1 putative adenylate and guanylate cyclase catalytic domain-containing protein [Neospora caninum Liverpool] diamond 297 43.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
32461102 32461102 PRJDB3785_S_NODE_8719_length_255_cov_2.029126_g8566_i0 PRJDB3785 8719 255 2.029126 5.1742713 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 111 2.86e-28   NR OEH76901.1 88456 g8566 i0 74.7 9.76470588235294 75 19 88.2 0 1 225 99 173 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 2490 111 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
32845178 32845178 PRJDB3785_S_NODE_11340_length_226_cov_1.231638_g11187_i0 PRJDB3785 11340 226 1.231638 2.78350188 Cryptosporidium felis 83540 SAR_Eukaryotes SAR_Eukaryotes 50.8 7.48e-6   NR KAF7459076.1 83540 g11187 i0 55.6 1.18141592920354 45 19 59.7 1 90 224 10 53 KAF7459076.1 ribosomal protein RPL35A [Cryptosporidium felis] diamond 267 50.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;