contig_metadata
24 rows where bioproject = "PRJDB3785" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20409595 | 20409595 | PRJDB3785_S_NODE_7917_length_267_cov_1.100917_g7764_i0 | PRJDB3785 | 7917 | 267 | 1.100917 | 2.93944839 | Planctomycetia | 203683 | Bacteria | Bacteria | 135 | 1.18e-35 | NR | MDR1053142.1 | 2026779 | g7764 | i0 | 77.8 | 30.9887640449438 | 81 | 18 | 91 | 0 | 4 | 246 | 358 | 438 | MDR1053142.1 adenosylhomocysteinase [Planctomycetaceae bacterium] | diamond | 8274 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 24234738 | 24234738 | PRJDB3785_S_NODE_2840_length_462_cov_2.208232_g2689_i0 | PRJDB3785 | 2840 | 462 | 2.208232 | 10.20203184 | Gemmata massiliana | 1210884 | Bacteria | Bacteria | 268 | 4.0899999999999994e-67 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g2689 | i0 | 83.681 | 63.4285714285714 | 288 | 43 | 62 | 4 | 8 | 293 | 9030584 | 9030299 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 29304 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 27095602 | 27095602 | PRJDB3785_S_NODE_25402_length_164_cov_0.860870_g25249_i0 | PRJDB3785 | 25402 | 164 | 0.86087 | 1.4118268 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 90.5 | 7.24e-20 | NR | GDY17185.1 | 2026799 | g25249 | i0 | 65.4 | 5.70731707317073 | 52 | 18 | 95.1 | 0 | 160 | 5 | 283 | 334 | GDY17185.1 cyclopropane-fatty-acyl-phospholipid synthase [Verrucomicrobiota bacterium] | diamond | 936 | 90.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27126847 | 27126847 | PRJDB3785_S_NODE_9622_length_244_cov_1.179487_g9469_i0 | PRJDB3785 | 9622 | 244 | 1.179487 | 2.87794828 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 45.8 | 0.00176 | NR | MBQ3807801.1 | 2212473 | g9469 | i0 | 42.9 | 0.688524590163934 | 56 | 32 | 68.9 | 0 | 238 | 71 | 72 | 127 | MBQ3807801.1 hypothetical protein [Kiritimatiellia bacterium] | diamond | 168 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 27158560 | 27158560 | PRJDB3785_S_NODE_22302_length_169_cov_1.975000_g22149_i0 | PRJDB3785 | 22302 | 169 | 1.975 | 3.33775 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 41.2 | 0.04 | NR | MEI6341235.1 | 2026799 | g22149 | i0 | 42 | 0.887573964497041 | 50 | 27 | 85.2 | 1 | 7 | 150 | 109 | 158 | MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] | diamond | 150 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27317102 | 27317102 | PRJDB3785_S_NODE_14863_length_201_cov_1.894737_g14710_i0 | PRJDB3785 | 14863 | 201 | 1.894737 | 3.80842137 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 89.4 | 6.95e-21 | NR | MEI8196857.1 | 2026778 | g14710 | i0 | 62.1 | 1.97014925373134 | 66 | 25 | 98.5 | 0 | 200 | 3 | 7 | 72 | MEI8196857.1 aldolase/citrate lyase family protein [Phycisphaerae bacterium] | diamond | 396 | 89.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 27538100 | 27538100 | PRJDB3785_S_NODE_9284_length_248_cov_1.266332_g9131_i0 | PRJDB3785 | 9284 | 248 | 1.266332 | 3.14050336 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 116 | 1.29e-31 | NR | MFN9913585.1 | 2699754 | g9131 | i0 | 69.5 | 1.98387096774194 | 82 | 25 | 99.2 | 0 | 1 | 246 | 14 | 95 | MFN9913585.1 V-type ATP synthase subunit A [Pirellulaceae bacterium] | diamond | 492 | 116 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 27790707 | 27790707 | PRJDB3785_S_NODE_1684_length_615_cov_3.374558_g1549_i0 | PRJDB3785 | 1684 | 615 | 3.374558 | 20.7535317 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 54.3 | 8.62e-5 | NR | MEM7396574.1 | 2026799 | g1549 | i0 | 29 | 1.29268292682927 | 138 | 92 | 64.9 | 3 | 87 | 485 | 205 | 341 | MEM7396574.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 795 | 54.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28068825 | 28068825 | PRJDB3785_S_NODE_26525_length_162_cov_0.902655_g26372_i0 | PRJDB3785 | 26525 | 162 | 0.902655 | 1.4623011 | Bacteria | 2 | Bacteria | Bacteria | 56.2 | 2.22e-7 | NR | MDA1050033.1 | 2026780 | g26372 | i0 | 54.2 | 1.77777777777778 | 48 | 22 | 88.9 | 0 | 4 | 147 | 1256 | 1303 | MDA1050033.1 hypothetical protein [Planctomycetota bacterium] | diamond | 288 | 56.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28264045 | 28264045 | PRJDB3785_S_NODE_27346_length_161_cov_0.910714_g27193_i0 | PRJDB3785 | 27346 | 161 | 0.910714 | 1.46624954 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 77.8 | 3.74e-15 | NR | MBM4018201.1 | 2026780 | g27193 | i0 | 68.8 | 1.7888198757764 | 48 | 15 | 89.4 | 0 | 159 | 16 | 310 | 357 | MBM4018201.1 galactose mutarotase [Planctomycetota bacterium] | diamond | 288 | 77.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28832455 | 28832455 | PRJDB3785_S_NODE_27208_length_161_cov_0.910714_g27055_i0 | PRJDB3785 | 27208 | 161 | 0.910714 | 1.46624954 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 79.7 | 1.12e-15 | NR | MFT7643622.1 | 2699754 | g27055 | i0 | 67.3 | 0.968944099378882 | 52 | 17 | 96.9 | 0 | 161 | 6 | 772 | 823 | MFT7643622.1 NAD(P)H-dependent nitrite reductase large subunit/NAD(P)H-dependent nitrite reductase small subunit [Pirellulaceae bacterium] | diamond | 156 | 79.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 29274394 | 29274394 | PRJDB3785_S_NODE_15709_length_197_cov_0.918919_g15556_i0 | PRJDB3785 | 15709 | 197 | 0.918919 | 1.81027043 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 90.5 | 3.41e-20 | NR | MEO2031777.1 | 2026779 | g15556 | i0 | 54.7 | 0.974619289340102 | 64 | 29 | 97.5 | 0 | 3 | 194 | 95 | 158 | MEO2031777.1 phytanoyl-CoA dioxygenase family protein [Planctomycetaceae bacterium] | diamond | 192 | 90.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 29363510 | 29363510 | PRJDB3785_S_NODE_21629_length_172_cov_1.203252_g21476_i0 | PRJDB3785 | 21629 | 172 | 1.203252 | 2.06959344 | Urbifossiella | 2807415 | Bacteria | Bacteria | 80.9 | 4.67e-17 | NR | MBY0513773.1 | 2052164 | g21476 | i0 | 61.8 | 1.91860465116279 | 55 | 21 | 95.9 | 0 | 168 | 4 | 4 | 58 | MBY0513773.1 NAD(P)H:quinone oxidoreductase [Gemmataceae bacterium] | diamond | 330 | 80.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 29552621 | 29552621 | PRJDB3785_S_NODE_24570_length_165_cov_0.879310_g24417_i0 | PRJDB3785 | 24570 | 165 | 0.87931 | 1.4508615 | PVC group | 1783257 | Bacteria | Bacteria | 74.3 | 8.16e-14 | NR | MBP8299990.1 | 2026780 | g24417 | i0 | 64.8 | 9.78181818181818 | 54 | 19 | 98.2 | 0 | 2 | 163 | 284 | 337 | MBP8299990.1 acetyl-CoA C-acetyltransferase [Planctomycetota bacterium] | diamond | 1614 | 74.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29747908 | 29747908 | PRJDB3785_S_NODE_7031_length_283_cov_1.876068_g6878_i0 | PRJDB3785 | 7031 | 283 | 1.876068 | 5.30927244 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 99 | 1e-21 | NR | HYG84357.1 | 2499141 | g6878 | i0 | 58.2 | 0.964664310954064 | 91 | 35 | 93.3 | 2 | 267 | 4 | 116 | 206 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 273 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29969219 | 29969219 | PRJDB3785_S_NODE_11991_length_221_cov_1.011628_g11838_i0 | PRJDB3785 | 11991 | 221 | 1.011628 | 2.23569788 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 139 | 1.12e-37 | NR | MDZ4818359.1 | 2026780 | g11838 | i0 | 87.7 | 14.8642533936652 | 73 | 9 | 99.1 | 0 | 221 | 3 | 238 | 310 | MDZ4818359.1 NAD-dependent formate dehydrogenase [Planctomycetota bacterium] | diamond | 3285 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30152681 | 30152681 | PRJDB3785_S_NODE_11712_length_223_cov_1.172414_g11559_i0 | PRJDB3785 | 11712 | 223 | 1.172414 | 2.61448322 | Bacteria | 2 | Bacteria | Bacteria | 49.7 | 9.31e-5 | NR | KPK58091.1 | 1704029 | g11559 | i0 | 48.9 | 2.42152466367713 | 45 | 23 | 60.5 | 0 | 209 | 75 | 260 | 304 | KPK58091.1 MAG: hypothetical protein AMK73_09475 [Planctomycetes bacterium SM23_32] | diamond | 540 | 49.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetes bacterium SM23_32 | |||||
| 30443325 | 30443325 | PRJDB3785_S_NODE_19613_length_179_cov_1.484615_g19460_i0 | PRJDB3785 | 19613 | 179 | 1.484615 | 2.65746085 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 76.6 | 1.48e-14 | NR | MDD5771334.1 | 2035772 | g19460 | i0 | 64.4 | 4.91061452513966 | 59 | 21 | 98.9 | 0 | 3 | 179 | 35 | 93 | MDD5771334.1 phosphoglycerate kinase [Candidatus Omnitrophota bacterium] | diamond | 879 | 76.6 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 31201063 | 31201063 | PRJDB3785_S_NODE_20255_length_177_cov_0.992188_g20102_i0 | PRJDB3785 | 20255 | 177 | 0.992188 | 1.75617276 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 46.2 | 9.2e-4 | NR | MEM9800773.1 | 2026780 | g20102 | i0 | 48 | 0.847457627118644 | 50 | 26 | 84.7 | 0 | 23 | 172 | 405 | 454 | MEM9800773.1 hypothetical protein [Planctomycetota bacterium] | diamond | 150 | 46.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31422878 | 31422878 | PRJDB3785_S_NODE_26396_length_162_cov_0.911504_g26243_i0 | PRJDB3785 | 26396 | 162 | 0.911504 | 1.47663648 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 49.7 | 4.58e-5 | NR | MDC0647085.1 | 2026772 | g26243 | i0 | 52.1 | 0.888888888888889 | 48 | 23 | 88.9 | 0 | 159 | 16 | 1248 | 1295 | MDC0647085.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Opitutales bacterium] | diamond | 144 | 49.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 31486370 | 31486370 | PRJDB3785_S_NODE_5316_length_328_cov_2.222222_g5163_i0 | PRJDB3785 | 5316 | 328 | 2.222222 | 7.28888816 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 61.6 | 2.33e-8 | NR | HBJ37838.1 | 2026779 | g5163 | i0 | 40 | 0.86890243902439 | 95 | 41 | 84.1 | 4 | 278 | 3 | 659 | 740 | HBJ37838.1 deoxyribodipyrimidine photolyase [Planctomycetaceae bacterium] | diamond | 285 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 31612694 | 31612694 | PRJDB3785_S_NODE_7916_length_267_cov_1.165138_g7763_i0 | PRJDB3785 | 7916 | 267 | 1.165138 | 3.11091846 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 43.9 | 0.0184 | NR | HXQ80725.1 | 2006848 | g7763 | i0 | 41.7 | 3.35955056179775 | 48 | 28 | 53.9 | 0 | 266 | 123 | 193 | 240 | HXQ80725.1 serine/threonine-protein kinase [Opitutaceae bacterium] | diamond | 897 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 32055472 | 32055472 | PRJDB3785_S_NODE_25358_length_164_cov_0.878261_g25205_i0 | PRJDB3785 | 25358 | 164 | 0.878261 | 1.44034804 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 52.8 | 7.7e-7 | NR | MBY0262496.1 | 2052180 | g25205 | i0 | 59 | 0.713414634146341 | 39 | 16 | 71.3 | 0 | 135 | 19 | 8 | 46 | MBY0262496.1 globin [Phycisphaerales bacterium] | diamond | 117 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32435551 | 32435551 | PRJDB3785_S_NODE_14799_length_202_cov_0.895425_g14646_i0 | PRJDB3785 | 14799 | 202 | 0.895425 | 1.8087585 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 42.4 | 0.0305 | NR | MDR1789864.1 | 2006848 | g14646 | i0 | 52.5 | 0.594059405940594 | 40 | 11 | 47.5 | 2 | 61 | 156 | 528 | 567 | MDR1789864.1 hypothetical protein [Opitutaceae bacterium] | diamond | 120 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;