RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB3785", tax_clade = "Opisthokonta" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJDB3785 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30974559 30974559 PRJDB3785_S_NODE_18134_length_185_cov_1.492647_g17981_i0 PRJDB3785 18134 185 1.492647 2.76139695 Eukaryota 2759 Fungi Fungi 48.5 1.04e-4   NR PJF19956.1 1246581 g17981 i0 47.8 3.30810810810811 46 24 74.6 0 138 1 43 88 PJF19956.1 hypothetical protein PSACC_00229 [Paramicrosporidium saccamoebae] diamond 612 48.9 0.991820040899796 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30974561 30974561 PRJDB3785_S_NODE_21654_length_172_cov_1.008130_g21501_i0 PRJDB3785 21654 172 1.00813 1.7339836 Opisthokonta 33154 Fungi Fungi 72 6.54e-13   NR EPZ32651.1 988480 g21501 i0 72.7 6.68023255813953 55 15 95.9 0 167 3 506 560 EPZ32651.1 Heat shock protein SSC1, mitochondrial [Rozella allomycis CSF55] diamond 1149 72 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32118979 32118979 PRJDB3785_S_NODE_9558_length_244_cov_6.476923_g9405_i0 PRJDB3785 9558 244 6.476923 15.80369212 Rozella allomycis CSF55 988480 Fungi Fungi 82.4 7.49e-17   NR EPZ34692.1 988480 g9405 i0 66.2 3.86065573770492 65 21 78.7 1 23 214 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;