RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJDB3785", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJDB3785 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27121047 27121047 PRJDB3785_S_NODE_4522_length_357_cov_7.269481_g4369_i0 PRJDB3785 4522 357 7.269481 25.95204717 root 1 Root_unresolved Root_unresolved 114 2.17e-30   NR KAA6379614.1 222440 g4369 i0 58.1 3.07563025210084 93 39 78.2 0 345 67 1 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 1098 114 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
27632812 27632812 PRJDB3785_S_NODE_7904_length_267_cov_1.389908_g7751_i0 PRJDB3785 7904 267 1.389908 3.71105436 Streblomastix strix 222440 Preaxostyla other_Eukaryota 68.9 1.35e-11   NR KAA6375409.1 222440 g7751 i0 50.8 0.730337078651685 65 31 73 1 261 67 9 72 KAA6375409.1 MAG: putative autophagy protein 3 [Streblomastix strix] diamond 195 68.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
28643262 28643262 PRJDB3785_S_NODE_22487_length_169_cov_1.100000_g22334_i0 PRJDB3785 22487 169 1.1 1.859 Streblomastix strix 222440 Preaxostyla other_Eukaryota 91.3 2.2400000000000003e-21   NR KAA6402130.1 222440 g22334 i0 73.2 0.994082840236686 56 15 99.4 0 169 2 92 147 KAA6402130.1 MAG: putative Box H/ACA snoRNP component [Streblomastix strix] diamond 168 91.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;