RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB3785", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJDB3785 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26779292 26779292 PRJDB3785_S_NODE_12881_length_214_cov_0.927273_g12728_i0 PRJDB3785 12881 214 0.927273 1.98436422 Fidelibacterota bacterium 2026760 Bacteria Bacteria 54.7 9.68e-7   NR HIA23800.1 2026760 g12728 i0 72.2 1.51401869158878 36 10 50.5 0 208 101 189 224 HIA23800.1 ATP synthase F1 subunit gamma [Fidelibacterota bacterium] diamond 324 54.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31422872 31422872 PRJDB3785_S_NODE_22796_length_168_cov_1.159664_g22643_i0 PRJDB3785 22796 168 1.159664 1.94823552 Fidelibacterota bacterium 2026760 Bacteria Bacteria 103 6.819999999999999e-24   NR MBT3518710.1 2026760 g22643 i0 83.6 21.6071428571429 55 9 98.2 0 3 167 795 849 MBT3518710.1 aminomethyl-transferring glycine dehydrogenase [Fidelibacterota bacterium] diamond 3630 103 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;