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contig_metadata

20 rows where bioproject = "PRJDB3785", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 20 ✖

tax_clade 1

  • Discoba · 20 ✖

bioproject 1

  • PRJDB3785 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
981160 981160 PRJDB3785_S_NODE_21421_length_172_cov_3.723577_g21268_i0 PRJDB3785 21421 172 3.723577 6.40455244 Leishmania 5658 Euglenozoa other_Eukaryota 189 1.0499999999999996e-43   NTclustered gi|8039172|emb|AL356456.1| 5664 g21268 i0 88.462 317.162790697674 156 18 91 0 17 172 85284 85129 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence blastn 54552 189 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
4809101 4809101 PRJDB3785_S_NODE_21264_length_173_cov_1.233871_g21111_i0 PRJDB3785 21264 173 1.233871 2.13459683 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 137 3.8999999999999995e-28   NTclustered gi|2593252916|emb|OY748428.1| 5660 g21111 i0 85.496 27.3526011560694 131 19 76 0 3 133 1514952 1515082 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 34 blastn 4732 137 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
11486690 11486690 PRJDB3785_S_NODE_16890_length_191_cov_1.211268_g16737_i0 PRJDB3785 16890 191 1.211268 2.31352188 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 211 2.56e-50   NTclustered gi|226347420|gb|FJ807250.1| 127150 g16737 i0 87.432 91.9162303664921 183 23 96 0 5 187 1167 985 Rhynchomonas nasuta strain ATCC 50292 elongation factor 1 alpha mRNA, partial cds blastn 17556 211 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
15311044 15311044 PRJDB3785_S_NODE_5913_length_310_cov_2.157088_g5760_i0 PRJDB3785 5913 310 2.157088 6.6869728 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 398 3.2299999999999996e-106   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g5760 i0 89.873 134.654838709677 316 23 99 7 1 308 4802 4488 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 41743 398 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
17860605 17860605 PRJDB3785_S_NODE_17275_length_189_cov_1.428571_g17122_i0 PRJDB3785 17275 189 1.428571 2.69999919 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 52.8 0.016   NTclustered gi|1624749507|ref|XM_029025682.1| 67003 g17122 i0 92.105 0.201058201058201 38 2 20 1 1 37 2568 2605 Trypanosoma theileri uncharacterized protein (TM35_000142370), partial mRNA blastn 38 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
19134384 19134384 PRJDB3785_S_NODE_24496_length_165_cov_0.879310_g24343_i0 PRJDB3785 24496 165 0.87931 1.4508615 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 267 4.53e-67   NTclustered gi|1673141461|ref|XR_003828664.1| 83891 g24343 i0 95.758 109.860606060606 165 7 100 0 1 165 5215 5051 Trypanosoma conorhini 28S ribosomal RNA (Tco025E_06705), rRNA blastn 18127 267 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
20409567 20409567 PRJDB3785_S_NODE_6137_length_304_cov_1.662745_g5984_i0 PRJDB3785 6137 304 1.662745 5.0547448 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 175 1.06e-51   NR EPY33803.1 28005 g5984 i0 79 9.86842105263158 100 21 98.7 0 302 3 204 303 EPY33803.1 elongation factor 1-alpha [Strigomonas culicis] diamond 3000 175 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
23933617 23933617 PRJDB3785_S_NODE_26359_length_162_cov_1.159292_g26206_i0 PRJDB3785 26359 162 1.159292 1.87805304 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 158 2.78e-34   NTclustered gi|2414483|emb|Y00055.1| 5656 g26206 i0 96.809 83.9938271604938 94 3 58 0 1 94 8156 8063 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 13607 158 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
24234575 24234575 PRJDB3785_S_NODE_12920_length_213_cov_3.743902_g12767_i0 PRJDB3785 12920 213 3.743902 7.97451126 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 113 1.23e-27   NR TPP51631.1 5661 g12767 i0 72.9 26.6197183098592 70 19 98.6 0 3 212 306 375 TPP51631.1 translation elongation factor EF-1, subunit alpha [Leishmania donovani] diamond 5670 113 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
24234758 24234758 PRJDB3785_S_NODE_3840_length_391_cov_1.517544_g3687_i0 PRJDB3785 3840 391 1.517544 5.93359704 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 192 4.7199999999999994e-57   NR KNH05488.1 1314962 g3687 i0 70 4.96419437340153 130 37 99.7 1 2 391 229 356 KNH05488.1 ribosomal protein L3 [Perkinsela sp. CCAP 1560/4] diamond 1941 192 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
25207264 25207264 PRJDB3785_S_NODE_24400_length_165_cov_1.206897_g24247_i0 PRJDB3785 24400 165 1.206897 1.99138005 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 204 3.5999999999999995e-48   NTclustered gi|440222381|gb|JX030049.1| 5659 g24247 i0 89.157 95.5818181818182 166 15 100 3 1 165 20 183 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 15771 206 0.990291262135922 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
27095605 27095605 PRJDB3785_S_NODE_27302_length_161_cov_0.910714_g27149_i0 PRJDB3785 27302 161 0.910714 1.46624954 Euglena gracilis 3039 Euglenozoa other_Eukaryota 88.6 8.62e-19   NR AAF71706.1 3039 g27149 i0 79.2 2.96273291925466 53 11 98.8 0 2 160 372 424 AAF71706.1 elongation factor 2, partial [Euglena gracilis] diamond 477 88.6 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28485275 28485275 PRJDB3785_S_NODE_5827_length_312_cov_2.536122_g5674_i0 PRJDB3785 5827 312 2.536122 7.91270064 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 68.9 5.71e-12   NR EPY31477.1 28005 g5674 i0 41.7 0.990384615384615 103 49 91.3 5 310 26 3 102 EPY31477.1 IgE-dependent histamine-releasing factor [Strigomonas culicis] diamond 309 68.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
28826413 28826413 PRJDB3785_S_NODE_13448_length_210_cov_1.149068_g13295_i0 PRJDB3785 13448 210 1.149068 2.4130428 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 72.8 6.11e-13   NR XP_067081308.1 5694 g13295 i0 60 5.47142857142857 60 24 85.7 0 30 209 221 280 XP_067081308.1 major vault protein, putative [Trypanosoma equiperdum] diamond 1149 73.2 0.994535519125683 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
29457827 29457827 PRJDB3785_S_NODE_16070_length_195_cov_1.123288_g15917_i0 PRJDB3785 16070 195 1.123288 2.1904116 Trypanosoma 5690 Euglenozoa other_Eukaryota 80.1 3.83e-17   NR 5T5H_P 5693 g15917 i0 65.1 5.75384615384615 63 22 96.9 0 195 7 83 145 5T5H_P Chain P, 40S ribosomal protein L14 [Trypanosoma cruzi] diamond 1122 80.5 0.995031055900621 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
30443329 30443329 PRJDB3785_S_NODE_21353_length_173_cov_1.096774_g21200_i0 PRJDB3785 21353 173 1.096774 1.89741902 Bodo saltans 75058 Euglenozoa other_Eukaryota 88.2 2.05e-20   NR CUE63139.1 75058 g21200 i0 70.2 5.93063583815029 57 17 98.8 0 172 2 18 74 CUE63139.1 40S ribosomal protein S18, putative [Bodo saltans] diamond 1026 88.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31327922 31327922 PRJDB3785_S_NODE_12836_length_214_cov_1.539394_g12683_i0 PRJDB3785 12836 214 1.539394 3.29430316 Leishmania braziliensis 5660 Euglenozoa other_Eukaryota 104 1.0999999999999998e-24   NR CAJ2470497.1 5660 g12683 i0 69.6 1.86448598130841 69 21 96.7 0 213 7 161 229 CAJ2470497.1 unnamed protein product [Leishmania braziliensis] diamond 399 104 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
31897341 31897341 PRJDB3785_S_NODE_16757_length_192_cov_1.006993_g16604_i0 PRJDB3785 16757 192 1.006993 1.93342656 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 97.8 9.55e-25   NR XP_067193009.1 715481 g16604 i0 66.7 0.984375 63 21 98.4 0 191 3 27 89 XP_067193009.1 HpcH/HpaI aldolase/citrate lyase domain [Trypanosoma melophagium] diamond 189 97.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
32429424 32429424 PRJDB3785_S_NODE_10519_length_233_cov_3.027174_g10366_i0 PRJDB3785 10519 233 3.027174 7.05331542 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92.8 6.98e-22   NR XP_029237886.1 5698 g10366 i0 59.2 1.96995708154506 76 30 97.9 1 228 1 70 144 XP_029237886.1 60S ribosomal protein L4, partial [Trypanosoma rangeli] diamond 459 93.2 0.995708154506438 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
32719271 32719271 PRJDB3785_S_NODE_9160_length_249_cov_2.280000_g9007_i0 PRJDB3785 9160 249 2.28 5.6772 Euglena gracilis 3039 Euglenozoa other_Eukaryota 82 1.46e-16   NR QLA09580.1 3039 g9007 i0 54.8 1.75903614457831 73 31 88 1 249 31 48 118 QLA09580.1 40S small subunit ribosomal protein eS4 [Euglena gracilis] diamond 438 82 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;