RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB14275" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJDB14275 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26804933 26804933 PRJDB14275_P_NODE_1581_length_571_cov_4.988722_g1523_i0 PRJDB14275 1581 571 4.988722 28.48560262 Bacteria 2 Bacteria Bacteria 199 9.38e-62   NR WP_015405804.1 65555 g1523 i0 58.3 12.3047285464098 180 75 94.6 0 544 5 1 180 WP_015405804.1 recombinase family protein [Desulfocapsa sulfexigens] diamond 7026 201 0.990049751243781 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfocapsa Desulfocapsa sulfexigens
27411950 27411950 PRJDB14275_P_NODE_6843_length_173_cov_0.910448_g6784_i0 PRJDB14275 6843 173 0.910448 1.57507504 Desulfobacterales bacterium 2044940 Bacteria Bacteria 44.7 0.00257   NR HID29325.1 2044940 g6784 i0 52.2 0.797687861271676 46 19 79.8 1 35 172 152 194 HID29325.1 DUF853 family protein [Desulfobacterales bacterium] diamond 138 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;