RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJDB14275" and tax_phylum = "Cyanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJDB14275 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2256386 2256386 PRJDB14275_P_NODE_7142_length_168_cov_0.945736_g7083_i0 PRJDB14275 7142 168 0.945736 1.58883648 Chroococcidiopsis 54298 Bacteria Bacteria 311 2.11e-80   NTclustered gi|428006994|gb|CP003597.1| 251229 g7083 i0 100 4.26785714285714 168 0 100 0 1 168 6124348 6124181 Chroococcidiopsis thermalis PCC 7203, complete genome blastn 717 311 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis thermalis
2558490 2558490 PRJDB14275_P_NODE_7003_length_170_cov_1.213740_g6944_i0 PRJDB14275 7003 170 1.21374 2.063358 Chroococcidiopsis thermalis 54299 Bacteria Bacteria 315 1.64e-81   NTclustered gi|428006994|gb|CP003597.1| 251229 g6944 i0 100 2 170 0 100 0 1 170 2290777 2290608 Chroococcidiopsis thermalis PCC 7203, complete genome blastn 340 315 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis thermalis
7660944 7660944 PRJDB14275_P_NODE_8367_length_151_cov_1.098214_g8308_i0 PRJDB14275 8367 151 1.098214 1.65830314 Chroococcidiopsis thermalis 54299 Bacteria Bacteria 268 1.12e-67   NTclustered gi|428006994|gb|CP003597.1| 251229 g8308 i0 99.324 1.97350993377483 148 1 98 0 1 148 5614717 5614864 Chroococcidiopsis thermalis PCC 7203, complete genome blastn 298 268 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis thermalis
14036682 14036682 PRJDB14275_P_NODE_7212_length_167_cov_1.132812_g7153_i0 PRJDB14275 7212 167 1.132812 1.89179604 uncultured cyanobacterium 1211 Bacteria Bacteria 283 4.56e-72   NTclustered gi|238955308|emb|FM252972.1| 1211 g7153 i0 98.742 105.077844311377 159 2 95 0 9 167 231 73 Uncultured cyanobacterium partial 16S rRNA gene, clone NL8BD-02-H04 blastn 17548 283 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium
15008946 15008946 PRJDB14275_P_NODE_4352_length_256_cov_1.000000_g4293_i0 PRJDB14275 4352 256 1 2.56 Geminocystis 669357 Bacteria Bacteria 89.8 1.77e-13   NTclustered gi|770466698|dbj|AP014815.1| 1615909 g4293 i0 94.737 20.0234375 57 3 22 0 191 247 599427 599371 Geminocystis sp. NIES-3708 DNA, complete genome blastn 5126 89.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Geminocystis Geminocystis sp. NIES-3708
19134164 19134164 PRJDB14275_P_NODE_7076_length_169_cov_0.938462_g7017_i0 PRJDB14275 7076 169 0.938462 1.58600078 Chroococcidiopsis sp. CCNUC1 2653189 Bacteria Bacteria 307 2.73e-79   NTclustered gi|2245124533|gb|CP097480.1| 2653189 g7017 i0 99.408 2 169 1 100 0 1 169 5938832 5938664 Chroococcidiopsis sp. CCNUC1 chromosome, complete genome blastn 338 307 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis sp. CCNUC1
22960586 22960586 PRJDB14275_P_NODE_8479_length_150_cov_1.225225_g8420_i0 PRJDB14275 8479 150 1.225225 1.8378375 Chroococcidiopsis thermalis 54299 Bacteria Bacteria 154 3.26e-33   NTclustered gi|428006994|gb|CP003597.1| 251229 g8420 i0 94.059 3.86666666666667 101 6 84 0 25 125 5719974 5720074 Chroococcidiopsis thermalis PCC 7203, complete genome blastn 580 154 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis thermalis
26620853 26620853 PRJDB14275_P_NODE_7061_length_169_cov_1.246154_g7002_i0 PRJDB14275 7061 169 1.246154 2.10600026 Chroococcidiopsis sp. SAG 2 3088168 Bacteria Bacteria 114 3.66e-30   NR WP_317110889.1 171389 g7002 i0 96.4 3.97633136094675 56 2 99.4 0 1 168 127 182 WP_317110889.1 transposase [Chroococcidiopsis sp. SAG 2025] diamond 672 114 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis sp. SAG 2025
28074669 28074669 PRJDB14275_P_NODE_7225_length_167_cov_0.929688_g7166_i0 PRJDB14275 7225 167 0.929688 1.55257896 Chroococcidiopsis cubana 171392 Bacteria Bacteria 100 4.76e-24   NR WP_106166026.1 171392 g7166 i0 89.1 0.988023952095808 55 6 98.8 0 166 2 6 60 WP_106166026.1 glycosyltransferase family 2 protein [Chroococcidiopsis cubana] diamond 165 100 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis cubana
29969209 29969209 PRJDB14275_P_NODE_7111_length_168_cov_1.565891_g7052_i0 PRJDB14275 7111 168 1.565891 2.63069688 Nostoc sp. UHCC 1180 Bacteria Bacteria 106 2.16e-25   NR WP_341530000.1 3134896 g7052 i0 92.7 1.96428571428571 55 4 98.2 0 1 165 38 92 WP_341530000.1 IS701 family transposase [Nostoc sp. UHCC 0302] diamond 330 106 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. UHCC 0302
30032517 30032517 PRJDB14275_P_NODE_5131_length_220_cov_1.806630_g5072_i0 PRJDB14275 5131 220 1.80663 3.974586 Chroococcidiopsis cubana 171392 Bacteria Bacteria 144 5.91e-42   NR MDZ4876772.1 388085 g5072 i0 100 0.995454545454545 73 0 99.5 0 219 1 14 86 MDZ4876772.1 ISAs1 family transposase ISPlr1 [Chroococcidiopsis cubana SAG 39.79] diamond 219 144 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis cubana
31707494 31707494 PRJDB14275_P_NODE_7477_length_163_cov_0.975806_g7418_i0 PRJDB14275 7477 163 0.975806 1.59056378 Chroococcidiopsidales cyanobacterium LEGE 13417 1828829 Bacteria Bacteria 110 5.01e-28   NR MBE9017556.1 1828829 g7418 i0 100 0.993865030674847 54 0 99.4 0 2 163 82 135 MBE9017556.1 hypothetical protein [Chroococcidiopsidales cyanobacterium LEGE 13417] diamond 162 110 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales     Chroococcidiopsidales cyanobacterium LEGE 13417

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;