RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB14275", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJDB14275 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28358770 28358770 PRJDB14275_P_NODE_4986_length_226_cov_1.716578_g4927_i0 PRJDB14275 4986 226 1.716578 3.87946628 Kofleriaceae bacterium 2212474 Bacteria Bacteria 48.1 2.53e-5   NR HEX8106689.1 2212474 g4927 i0 45.5 0.730088495575221 55 30 73 0 179 15 6 60 HEX8106689.1 hypothetical protein [Kofleriaceae bacterium] diamond 165 48.1 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29747877 29747877 PRJDB14275_P_NODE_4691_length_238_cov_2.135678_g4632_i0 PRJDB14275 4691 238 2.135678 5.08291364 Myxococcota bacterium 2818507 Bacteria Bacteria 78.2 6.14e-16   NR MEM6791532.1 2818507 g4632 i0 50 0.907563025210084 72 33 90.8 2 14 229 19 87 MEM6791532.1 hypothetical protein [Myxococcota bacterium] diamond 216 78.2 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;